Gene : Glyma.07G027400 G. max Wm82.a2.v1
Defline:  (1 of 22) PTHR23042//PTHR23042:SF57 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS Genomic Order:  274
Name:  ? Glyma.07G027400 Secondary Identifier:  ? PAC:30492805
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G027400 0.5kb upstream 0.5kb upstream 5537 true Chr07: 2170765-2176301 Glycine max
Glyma.07G027400 0.5kb upstream 0.5kb upstream 500 false Chr07: 2175802-2176301 Glycine max
Glyma.07G027400 0.5kb downstream 0.5kb downstream 5537 true Chr07: 2170265-2175801 Glycine max
Glyma.07G027400 0.5kb downstream 0.5kb downstream 500 false Chr07: 2170265-2170764 Glycine max
Glyma.07G027400 1.0kb upstream 1.0kb upstream 6037 true Chr07: 2170765-2176801 Glycine max
Glyma.07G027400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 2175802-2176801 Glycine max
Glyma.07G027400 1.0kb downstream 1.0kb downstream 6037 true Chr07: 2169765-2175801 Glycine max
Glyma.07G027400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 2169765-2170764 Glycine max
Glyma.07G027400 2.0kb upstream 2.0kb upstream 7037 true Chr07: 2170765-2177801 Glycine max
Glyma.07G027400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 2175802-2177801 Glycine max
Glyma.07G027400 2.0kb downstream 2.0kb downstream 7037 true Chr07: 2168765-2175801 Glycine max
Glyma.07G027400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 2168765-2170764 Glycine max
Glyma.07G027400 5.0kb upstream 5.0kb upstream 10037 true Chr07: 2170765-2180801 Glycine max
Glyma.07G027400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 2175802-2180801 Glycine max
Glyma.07G027400 5.0kb downstream 5.0kb downstream 10037 true Chr07: 2165765-2175801 Glycine max
Glyma.07G027400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 2165765-2170764 Glycine max
Glyma.07G027400 10.0kb upstream 10.0kb upstream 15037 true Chr07: 2170765-2185801 Glycine max
Glyma.07G027400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 2175802-2185801 Glycine max
Glyma.07G027400 10.0kb downstream 10.0kb downstream 15037 true Chr07: 2160765-2175801 Glycine max
Glyma.07G027400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 2160765-2170764 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296367 5265 Fabidae View MSA
124051641 5270 Rosid View MSA
123749435 5271 Pentapetalae View MSA
122795103 5272 Eudicot View MSA
122042005 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.18849 0.0 7.56651   Low
cufflinks 8.47326 0.0 24.4567    
cufflinks 4.77002 0.0 14.8527    
cufflinks 15.7799 0.0 42.9688    
cufflinks 12.391 0.0 34.4074    
cufflinks 32.8511 0.0 87.6765 High High
cufflinks 6.64833 0.0 19.8734    
cufflinks 5.47838 0.0 16.7495    
cufflinks 12.2319 0.0 33.9572    
cufflinks 3.418        
cufflinks 0.924       Low
cufflinks 2.989        
cufflinks 5.5       High
cufflinks 2.116        
cufflinks 0.316       Low
cufflinks 2.946        
cufflinks 5.906       High
cufflinks 1.731        
cufflinks 5.554       High
cufflinks 2.192        
cufflinks 1.138        
cufflinks 2.599        
cufflinks 4.471        
cufflinks 1.443        
cufflinks 3.476        
cufflinks 2.466        

0 Strain