Gene : Glyma.07G015000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10682//PTHR10682:SF24 - POLY A POLYMERASE Genomic Order:  150
Name:  ? Glyma.07G015000 Secondary Identifier:  ? PAC:30494651
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G015000 0.5kb upstream 0.5kb upstream 5661 true Chr07: 1177935-1183595 Glycine max
Glyma.07G015000 0.5kb upstream 0.5kb upstream 500 false Chr07: 1177935-1178434 Glycine max
Glyma.07G015000 0.5kb downstream 0.5kb downstream 5661 true Chr07: 1178435-1184095 Glycine max
Glyma.07G015000 0.5kb downstream 0.5kb downstream 500 false Chr07: 1183596-1184095 Glycine max
Glyma.07G015000 1.0kb upstream 1.0kb upstream 6161 true Chr07: 1177435-1183595 Glycine max
Glyma.07G015000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 1177435-1178434 Glycine max
Glyma.07G015000 1.0kb downstream 1.0kb downstream 6161 true Chr07: 1178435-1184595 Glycine max
Glyma.07G015000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 1183596-1184595 Glycine max
Glyma.07G015000 2.0kb upstream 2.0kb upstream 7161 true Chr07: 1176435-1183595 Glycine max
Glyma.07G015000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 1176435-1178434 Glycine max
Glyma.07G015000 2.0kb downstream 2.0kb downstream 7161 true Chr07: 1178435-1185595 Glycine max
Glyma.07G015000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 1183596-1185595 Glycine max
Glyma.07G015000 5.0kb upstream 5.0kb upstream 10161 true Chr07: 1173435-1183595 Glycine max
Glyma.07G015000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 1173435-1178434 Glycine max
Glyma.07G015000 5.0kb downstream 5.0kb downstream 10161 true Chr07: 1178435-1188595 Glycine max
Glyma.07G015000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 1183596-1188595 Glycine max
Glyma.07G015000 10.0kb upstream 10.0kb upstream 15161 true Chr07: 1168435-1183595 Glycine max
Glyma.07G015000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 1168435-1178434 Glycine max
Glyma.07G015000 10.0kb downstream 10.0kb downstream 15161 true Chr07: 1178435-1193595 Glycine max
Glyma.07G015000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 1183596-1193595 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309530 5265 Fabidae View MSA
124066442 5270 Rosid View MSA
123745238 5271 Pentapetalae View MSA
122790232 5272 Eudicot View MSA
122045017 5273 Angiosperm View MSA
123429108 5275 Viridiplantae View MSA
121348362 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.9626 0.0 43.0393    
cufflinks 11.4384 0.0 30.5347    
cufflinks 25.7423 0.0 72.1422 High High
cufflinks 11.1743 0.0 29.8254    
cufflinks 8.95584 0.0 23.9152    
cufflinks 6.33818 0.0 17.0972   Low
cufflinks 11.8185 0.0 31.5596    
cufflinks 11.9357 0.0 31.8828    
cufflinks 9.04742 0.0 24.1544    
cufflinks 8.311     High Low
cufflinks 13.254     High  
cufflinks 19.983     High  
cufflinks 5.715       Low
cufflinks 6.437       Low
cufflinks 15.657     High  
cufflinks 13.639     High  
cufflinks 8.927     High  
cufflinks 31.699     High High
cufflinks 13.046     High  
cufflinks 19.891     High  
cufflinks 13.707     High  
cufflinks 17.048     High  
cufflinks 12.63     High  
cufflinks 14.907     High  
cufflinks 15.654     High  
cufflinks 11.906     High  

0 Strain