Gene : PhHAL.2G439200 P. hallii HAL v2.1

Defline:  (1 of 1) K15171 - transcription elongation factor SPT4 (SUPT4H1, SPT4) Genomic Order:  3793
Name:  ? PhHAL.2G439200 Secondary Identifier:  ? PAC:40412091

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.2G439200 0.5kb upstream 0.5kb upstream 3298 true Chr02: 55018761-55022058 Panicum hallii HAL
PhHAL.2G439200 0.5kb upstream 0.5kb upstream 500 false Chr02: 55021559-55022058 Panicum hallii HAL
PhHAL.2G439200 0.5kb downstream 0.5kb downstream 3298 true Chr02: 55018261-55021558 Panicum hallii HAL
PhHAL.2G439200 0.5kb downstream 0.5kb downstream 500 false Chr02: 55018261-55018760 Panicum hallii HAL
PhHAL.2G439200 1.0kb upstream 1.0kb upstream 3798 true Chr02: 55018761-55022558 Panicum hallii HAL
PhHAL.2G439200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 55021559-55022558 Panicum hallii HAL
PhHAL.2G439200 1.0kb downstream 1.0kb downstream 3798 true Chr02: 55017761-55021558 Panicum hallii HAL
PhHAL.2G439200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 55017761-55018760 Panicum hallii HAL
PhHAL.2G439200 2.0kb upstream 2.0kb upstream 4798 true Chr02: 55018761-55023558 Panicum hallii HAL
PhHAL.2G439200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 55021559-55023558 Panicum hallii HAL
PhHAL.2G439200 2.0kb downstream 2.0kb downstream 4798 true Chr02: 55016761-55021558 Panicum hallii HAL
PhHAL.2G439200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 55016761-55018760 Panicum hallii HAL
PhHAL.2G439200 5.0kb upstream 5.0kb upstream 7798 true Chr02: 55018761-55026558 Panicum hallii HAL
PhHAL.2G439200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 55021559-55026558 Panicum hallii HAL
PhHAL.2G439200 5.0kb downstream 5.0kb downstream 7798 true Chr02: 55013761-55021558 Panicum hallii HAL
PhHAL.2G439200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 55013761-55018760 Panicum hallii HAL
PhHAL.2G439200 10.0kb upstream 10.0kb upstream 12798 true Chr02: 55018761-55031558 Panicum hallii HAL
PhHAL.2G439200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 55021559-55031558 Panicum hallii HAL
PhHAL.2G439200 10.0kb downstream 10.0kb downstream 12798 true Chr02: 55008761-55021558 Panicum hallii HAL
PhHAL.2G439200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 55008761-55018760 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177330 5267 Panicoideae View MSA
124585745 5269 Grass View MSA
122042342 5273 Angiosperm View MSA
121345840 5274 Embryophyte View MSA
123426410 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier