Gene : Glyma.07G019400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33222:SF3 - PROTEIN CURVATURE THYLAKOID 1C, CHLOROPLASTIC Genomic Order:  194
Name:  ? Glyma.07G019400 Secondary Identifier:  ? PAC:30494116
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G019400 0.5kb upstream 0.5kb upstream 4490 true Chr07: 1533696-1538185 Glycine max
Glyma.07G019400 0.5kb upstream 0.5kb upstream 500 false Chr07: 1537686-1538185 Glycine max
Glyma.07G019400 0.5kb downstream 0.5kb downstream 4490 true Chr07: 1533196-1537685 Glycine max
Glyma.07G019400 0.5kb downstream 0.5kb downstream 500 false Chr07: 1533196-1533695 Glycine max
Glyma.07G019400 1.0kb upstream 1.0kb upstream 4990 true Chr07: 1533696-1538685 Glycine max
Glyma.07G019400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 1537686-1538685 Glycine max
Glyma.07G019400 1.0kb downstream 1.0kb downstream 4990 true Chr07: 1532696-1537685 Glycine max
Glyma.07G019400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 1532696-1533695 Glycine max
Glyma.07G019400 2.0kb upstream 2.0kb upstream 5990 true Chr07: 1533696-1539685 Glycine max
Glyma.07G019400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 1537686-1539685 Glycine max
Glyma.07G019400 2.0kb downstream 2.0kb downstream 5990 true Chr07: 1531696-1537685 Glycine max
Glyma.07G019400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 1531696-1533695 Glycine max
Glyma.07G019400 5.0kb upstream 5.0kb upstream 8990 true Chr07: 1533696-1542685 Glycine max
Glyma.07G019400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 1537686-1542685 Glycine max
Glyma.07G019400 5.0kb downstream 5.0kb downstream 8990 true Chr07: 1528696-1537685 Glycine max
Glyma.07G019400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 1528696-1533695 Glycine max
Glyma.07G019400 10.0kb upstream 10.0kb upstream 13990 true Chr07: 1533696-1547685 Glycine max
Glyma.07G019400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 1537686-1547685 Glycine max
Glyma.07G019400 10.0kb downstream 10.0kb downstream 13990 true Chr07: 1523696-1537685 Glycine max
Glyma.07G019400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 1523696-1533695 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308331 5265 Fabidae View MSA
124068427 5270 Rosid View MSA
123747086 5271 Pentapetalae View MSA
122793406 5272 Eudicot View MSA
122042391 5273 Angiosperm View MSA
121347672 5274 Embryophyte View MSA
123425732 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 53.0672 0.0 204.802 High High
cufflinks 44.4638 0.0 154.199 High High
cufflinks 14.2963 0.0 51.893    
cufflinks 28.6868 0.0 96.1374 High  
cufflinks 13.7869 0.0 61.0056    
cufflinks 12.73 0.0 52.4323    
cufflinks 39.33 0.0 129.457 High  
cufflinks 23.4845 0.0 78.0609 High  
cufflinks 11.285 0.0 43.8617   Low
cufflinks 1.272        
cufflinks 0.057       Low
cufflinks 0.679        
cufflinks 0.275        
cufflinks 0.271        
cufflinks 0.082       Low
cufflinks 2.688       High
cufflinks 0.115        
cufflinks 0.868        
cufflinks 1.367        
cufflinks 2.82       High
cufflinks 0.092       Low
cufflinks 2.604       High
cufflinks 2.991       High
cufflinks 0.092       Low
cufflinks 3.006       High
cufflinks 0.114        

0 Strain