Gene : PhHAL.2G468100 P. hallii HAL v2.1

Defline:  (1 of 5) PF12854//PF13041//PF13812 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  4079
Name:  ? PhHAL.2G468100 Secondary Identifier:  ? PAC:40408407

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.2G468100 0.5kb upstream 0.5kb upstream 3346 true Chr02: 56643854-56647199 Panicum hallii HAL
PhHAL.2G468100 0.5kb upstream 0.5kb upstream 500 false Chr02: 56643854-56644353 Panicum hallii HAL
PhHAL.2G468100 0.5kb downstream 0.5kb downstream 3346 true Chr02: 56644354-56647699 Panicum hallii HAL
PhHAL.2G468100 0.5kb downstream 0.5kb downstream 500 false Chr02: 56647200-56647699 Panicum hallii HAL
PhHAL.2G468100 1.0kb upstream 1.0kb upstream 3846 true Chr02: 56643354-56647199 Panicum hallii HAL
PhHAL.2G468100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 56643354-56644353 Panicum hallii HAL
PhHAL.2G468100 1.0kb downstream 1.0kb downstream 3846 true Chr02: 56644354-56648199 Panicum hallii HAL
PhHAL.2G468100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 56647200-56648199 Panicum hallii HAL
PhHAL.2G468100 2.0kb upstream 2.0kb upstream 4846 true Chr02: 56642354-56647199 Panicum hallii HAL
PhHAL.2G468100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 56642354-56644353 Panicum hallii HAL
PhHAL.2G468100 2.0kb downstream 2.0kb downstream 4846 true Chr02: 56644354-56649199 Panicum hallii HAL
PhHAL.2G468100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 56647200-56649199 Panicum hallii HAL
PhHAL.2G468100 5.0kb upstream 5.0kb upstream 7846 true Chr02: 56639354-56647199 Panicum hallii HAL
PhHAL.2G468100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 56639354-56644353 Panicum hallii HAL
PhHAL.2G468100 5.0kb downstream 5.0kb downstream 7846 true Chr02: 56644354-56652199 Panicum hallii HAL
PhHAL.2G468100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 56647200-56652199 Panicum hallii HAL
PhHAL.2G468100 10.0kb upstream 10.0kb upstream 12846 true Chr02: 56634354-56647199 Panicum hallii HAL
PhHAL.2G468100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 56634354-56644353 Panicum hallii HAL
PhHAL.2G468100 10.0kb downstream 10.0kb downstream 12846 true Chr02: 56644354-56657199 Panicum hallii HAL
PhHAL.2G468100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 56647200-56657199 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197140 5267 Panicoideae View MSA
124574738 5269 Grass View MSA
122041778 5273 Angiosperm View MSA
121309888 5274 Embryophyte View MSA
123347524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier