Gene : Glyma.07G011300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR27001:SF152 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMM17-RELATED Genomic Order:  113
Name:  ? Glyma.07G011300 Secondary Identifier:  ? PAC:30495452
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G011300 0.5kb upstream 0.5kb upstream 6072 true Chr07: 855262-861333 Glycine max
Glyma.07G011300 0.5kb upstream 0.5kb upstream 500 false Chr07: 860834-861333 Glycine max
Glyma.07G011300 0.5kb downstream 0.5kb downstream 6072 true Chr07: 854762-860833 Glycine max
Glyma.07G011300 0.5kb downstream 0.5kb downstream 500 false Chr07: 854762-855261 Glycine max
Glyma.07G011300 1.0kb upstream 1.0kb upstream 6572 true Chr07: 855262-861833 Glycine max
Glyma.07G011300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 860834-861833 Glycine max
Glyma.07G011300 1.0kb downstream 1.0kb downstream 6572 true Chr07: 854262-860833 Glycine max
Glyma.07G011300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 854262-855261 Glycine max
Glyma.07G011300 2.0kb upstream 2.0kb upstream 7572 true Chr07: 855262-862833 Glycine max
Glyma.07G011300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 860834-862833 Glycine max
Glyma.07G011300 2.0kb downstream 2.0kb downstream 7572 true Chr07: 853262-860833 Glycine max
Glyma.07G011300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 853262-855261 Glycine max
Glyma.07G011300 5.0kb upstream 5.0kb upstream 10572 true Chr07: 855262-865833 Glycine max
Glyma.07G011300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 860834-865833 Glycine max
Glyma.07G011300 5.0kb downstream 5.0kb downstream 10572 true Chr07: 850262-860833 Glycine max
Glyma.07G011300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 850262-855261 Glycine max
Glyma.07G011300 10.0kb upstream 10.0kb upstream 15572 true Chr07: 855262-870833 Glycine max
Glyma.07G011300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 860834-870833 Glycine max
Glyma.07G011300 10.0kb downstream 10.0kb downstream 15572 true Chr07: 845262-860833 Glycine max
Glyma.07G011300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 845262-855261 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307157 5265 Fabidae View MSA
124066375 5270 Rosid View MSA
123738565 5271 Pentapetalae View MSA
122788767 5272 Eudicot View MSA
122047607 5273 Angiosperm View MSA
121351058 5274 Embryophyte View MSA
123381993 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.16263 0.0 8.90605    
cufflinks 7.613 0.0 20.3364   High
cufflinks 3.51636 0.0 9.75854    
cufflinks 4.28665 0.0 11.7331    
cufflinks 3.41868 0.0 9.55677    
cufflinks 3.81517 0.0 10.5482    
cufflinks 5.90472 0.0 15.8939    
cufflinks 1.4486 0.0 4.50682   Low
cufflinks 6.00819 0.0 16.1531    
cufflinks 1.454       Low
cufflinks 0.887       Low
cufflinks 4.944        
cufflinks 4.082        
cufflinks 3.215        
cufflinks 2.436        
cufflinks 6.702        
cufflinks 1.284       Low
cufflinks 6.635        
cufflinks 9.541     High High
cufflinks 7.37     High  
cufflinks 1.915        
cufflinks 8.363     High High
cufflinks 9.093     High High
cufflinks 1.736        
cufflinks 6.128        
cufflinks 1.995        

0 Strain