Gene : Glyma.07G006700 G. max Wm82.a2.v1
Defline:  (1 of 35) 1.13.11.58 - Linoleate 9S-lipoxygenase / Linoleate 9-lipoxygenase Genomic Order:  67
Name:  ? Glyma.07G006700 Secondary Identifier:  ? PAC:30491571
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5406 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G006700 0.5kb upstream 0.5kb upstream 4832 true Chr07: 491233-496064 Glycine max
Glyma.07G006700 0.5kb upstream 0.5kb upstream 500 false Chr07: 491233-491732 Glycine max
Glyma.07G006700 0.5kb downstream 0.5kb downstream 4832 true Chr07: 491733-496564 Glycine max
Glyma.07G006700 0.5kb downstream 0.5kb downstream 500 false Chr07: 496065-496564 Glycine max
Glyma.07G006700 1.0kb upstream 1.0kb upstream 5332 true Chr07: 490733-496064 Glycine max
Glyma.07G006700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 490733-491732 Glycine max
Glyma.07G006700 1.0kb downstream 1.0kb downstream 5332 true Chr07: 491733-497064 Glycine max
Glyma.07G006700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 496065-497064 Glycine max
Glyma.07G006700 2.0kb upstream 2.0kb upstream 6332 true Chr07: 489733-496064 Glycine max
Glyma.07G006700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 489733-491732 Glycine max
Glyma.07G006700 2.0kb downstream 2.0kb downstream 6332 true Chr07: 491733-498064 Glycine max
Glyma.07G006700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 496065-498064 Glycine max
Glyma.07G006700 5.0kb upstream 5.0kb upstream 9332 true Chr07: 486733-496064 Glycine max
Glyma.07G006700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 486733-491732 Glycine max
Glyma.07G006700 5.0kb downstream 5.0kb downstream 9332 true Chr07: 491733-501064 Glycine max
Glyma.07G006700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 496065-501064 Glycine max
Glyma.07G006700 10.0kb upstream 10.0kb upstream 14332 true Chr07: 481733-496064 Glycine max
Glyma.07G006700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 481733-491732 Glycine max
Glyma.07G006700 10.0kb downstream 10.0kb downstream 14332 true Chr07: 491733-506064 Glycine max
Glyma.07G006700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 496065-506064 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314818 5265 Fabidae View MSA
124052352 5270 Rosid View MSA
123750052 5271 Pentapetalae View MSA
122773445 5272 Eudicot View MSA
122049504 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0361306 0.0 0.149549 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.334548 0.0 1.25779    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.62507 0.0 16.0027    
cufflinks 7.38826 0.0 20.4601    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0116544 0.0 0.0527472 Low Low
cufflinks 23.7023 0.0 63.5583 High High
cufflinks 0.003     Low Low
cufflinks 212.504     High High
cufflinks 0.007     Low  
cufflinks 12.345     High  
cufflinks 8.075     High  
cufflinks 98.835     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 46.794     High  
cufflinks 0.007     Low  
cufflinks 0.004     Low Low
cufflinks 0.004     Low Low
cufflinks 150.215     High High
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 238.651     High High
cufflinks 0.01     Low  
cufflinks 258.071     High High

0 Strain