Gene : Glyma.07G049000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33222:SF9 - PROTEIN CURVATURE THYLAKOID 1B, CHLOROPLASTIC Genomic Order:  490
Name:  ? Glyma.07G049000 Secondary Identifier:  ? PAC:30493175
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G049000 0.5kb upstream 0.5kb upstream 2952 true Chr07: 4162544-4165495 Glycine max
Glyma.07G049000 0.5kb upstream 0.5kb upstream 500 false Chr07: 4164996-4165495 Glycine max
Glyma.07G049000 0.5kb downstream 0.5kb downstream 2952 true Chr07: 4162044-4164995 Glycine max
Glyma.07G049000 0.5kb downstream 0.5kb downstream 500 false Chr07: 4162044-4162543 Glycine max
Glyma.07G049000 1.0kb upstream 1.0kb upstream 3452 true Chr07: 4162544-4165995 Glycine max
Glyma.07G049000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 4164996-4165995 Glycine max
Glyma.07G049000 1.0kb downstream 1.0kb downstream 3452 true Chr07: 4161544-4164995 Glycine max
Glyma.07G049000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 4161544-4162543 Glycine max
Glyma.07G049000 2.0kb upstream 2.0kb upstream 4452 true Chr07: 4162544-4166995 Glycine max
Glyma.07G049000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 4164996-4166995 Glycine max
Glyma.07G049000 2.0kb downstream 2.0kb downstream 4452 true Chr07: 4160544-4164995 Glycine max
Glyma.07G049000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 4160544-4162543 Glycine max
Glyma.07G049000 5.0kb upstream 5.0kb upstream 7452 true Chr07: 4162544-4169995 Glycine max
Glyma.07G049000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 4164996-4169995 Glycine max
Glyma.07G049000 5.0kb downstream 5.0kb downstream 7452 true Chr07: 4157544-4164995 Glycine max
Glyma.07G049000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 4157544-4162543 Glycine max
Glyma.07G049000 10.0kb upstream 10.0kb upstream 12452 true Chr07: 4162544-4174995 Glycine max
Glyma.07G049000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 4164996-4174995 Glycine max
Glyma.07G049000 10.0kb downstream 10.0kb downstream 12452 true Chr07: 4152544-4164995 Glycine max
Glyma.07G049000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 4152544-4162543 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309257 5265 Fabidae View MSA
124068427 5270 Rosid View MSA
123747086 5271 Pentapetalae View MSA
122793406 5272 Eudicot View MSA
122042391 5273 Angiosperm View MSA
121347672 5274 Embryophyte View MSA
123425732 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 96.9676 0.0 401.196 High High
cufflinks 61.6211 0.0 235.446 High High
cufflinks 11.1466 0.0 35.9981    
cufflinks 30.7778 0.0 91.9518 High  
cufflinks 5.95272 0.0 22.8933    
cufflinks 8.26612 0.0 32.9305    
cufflinks 23.688 0.0 70.6861 High  
cufflinks 25.6312 0.0 76.3683 High  
cufflinks 2.11318 0.0 8.4373   Low
cufflinks 13.531     High  
cufflinks 0.036     Low Low
cufflinks 4.915        
cufflinks 0.096        
cufflinks 0.038     Low Low
cufflinks 0.047     Low  
cufflinks 29.402     High High
cufflinks 0.079        
cufflinks 6.757        
cufflinks 13.46     High  
cufflinks 26.086     High High
cufflinks 0.051     Low  
cufflinks 26.362     High High
cufflinks 23.55     High High
cufflinks 0.044     Low Low
cufflinks 34.125     High High
cufflinks 0.017     Low Low

0 Strain