Gene : Glyma.07G049100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11969:SF29 - TRANSCRIPTION FACTOR BHLH57-RELATED Genomic Order:  491
Name:  ? Glyma.07G049100 Secondary Identifier:  ? PAC:30495003
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G049100 0.5kb upstream 0.5kb upstream 3942 true Chr07: 4176470-4180411 Glycine max
Glyma.07G049100 0.5kb upstream 0.5kb upstream 500 false Chr07: 4179912-4180411 Glycine max
Glyma.07G049100 0.5kb downstream 0.5kb downstream 3942 true Chr07: 4175970-4179911 Glycine max
Glyma.07G049100 0.5kb downstream 0.5kb downstream 500 false Chr07: 4175970-4176469 Glycine max
Glyma.07G049100 1.0kb upstream 1.0kb upstream 4442 true Chr07: 4176470-4180911 Glycine max
Glyma.07G049100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 4179912-4180911 Glycine max
Glyma.07G049100 1.0kb downstream 1.0kb downstream 4442 true Chr07: 4175470-4179911 Glycine max
Glyma.07G049100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 4175470-4176469 Glycine max
Glyma.07G049100 2.0kb upstream 2.0kb upstream 5442 true Chr07: 4176470-4181911 Glycine max
Glyma.07G049100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 4179912-4181911 Glycine max
Glyma.07G049100 2.0kb downstream 2.0kb downstream 5442 true Chr07: 4174470-4179911 Glycine max
Glyma.07G049100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 4174470-4176469 Glycine max
Glyma.07G049100 5.0kb upstream 5.0kb upstream 8442 true Chr07: 4176470-4184911 Glycine max
Glyma.07G049100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 4179912-4184911 Glycine max
Glyma.07G049100 5.0kb downstream 5.0kb downstream 8442 true Chr07: 4171470-4179911 Glycine max
Glyma.07G049100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 4171470-4176469 Glycine max
Glyma.07G049100 10.0kb upstream 10.0kb upstream 13442 true Chr07: 4176470-4189911 Glycine max
Glyma.07G049100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 4179912-4189911 Glycine max
Glyma.07G049100 10.0kb downstream 10.0kb downstream 13442 true Chr07: 4166470-4179911 Glycine max
Glyma.07G049100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 4166470-4176469 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304826 5265 Fabidae View MSA
124067472 5270 Rosid View MSA
123749285 5271 Pentapetalae View MSA
122794835 5272 Eudicot View MSA
122051154 5273 Angiosperm View MSA
121350598 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.965935 0.0 3.90295    
cufflinks 11.872 0.0 46.406   High
cufflinks 1.51318 0.0 9.37849    
cufflinks 7.00653 0.0 30.4575    
cufflinks 0.789149 0.0 5.44116    
cufflinks 1.34122 0.0 6.66672    
cufflinks 24.1018 0.0 98.9972 High High
cufflinks 1.98376 0.0 10.6728    
cufflinks 0.761352 0.0 4.27327    
cufflinks 0.318        
cufflinks 0.007     Low Low
cufflinks 0.741        
cufflinks 0.066     Low  
cufflinks 0.04     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 7.175     High High
cufflinks 0.068     Low  
cufflinks 0.384        
cufflinks 2.673        
cufflinks 10.805     High High
cufflinks 0.008     Low Low
cufflinks 10.294     High High
cufflinks 9.164     High High
cufflinks 0.01     Low Low
cufflinks 7.2     High High
cufflinks 0.013     Low Low

0 Strain