Gene : Glyma.07G050800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR32295:SF0 - PROTEIN IQ-DOMAIN 17-RELATED Genomic Order:  508
Name:  ? Glyma.07G050800 Secondary Identifier:  ? PAC:30495622
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G050800 0.5kb upstream 0.5kb upstream 5133 true Chr07: 4383647-4388779 Glycine max
Glyma.07G050800 0.5kb upstream 0.5kb upstream 500 false Chr07: 4383647-4384146 Glycine max
Glyma.07G050800 0.5kb downstream 0.5kb downstream 5133 true Chr07: 4384147-4389279 Glycine max
Glyma.07G050800 0.5kb downstream 0.5kb downstream 500 false Chr07: 4388780-4389279 Glycine max
Glyma.07G050800 1.0kb upstream 1.0kb upstream 5633 true Chr07: 4383147-4388779 Glycine max
Glyma.07G050800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 4383147-4384146 Glycine max
Glyma.07G050800 1.0kb downstream 1.0kb downstream 5633 true Chr07: 4384147-4389779 Glycine max
Glyma.07G050800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 4388780-4389779 Glycine max
Glyma.07G050800 2.0kb upstream 2.0kb upstream 6633 true Chr07: 4382147-4388779 Glycine max
Glyma.07G050800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 4382147-4384146 Glycine max
Glyma.07G050800 2.0kb downstream 2.0kb downstream 6633 true Chr07: 4384147-4390779 Glycine max
Glyma.07G050800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 4388780-4390779 Glycine max
Glyma.07G050800 5.0kb upstream 5.0kb upstream 9633 true Chr07: 4379147-4388779 Glycine max
Glyma.07G050800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 4379147-4384146 Glycine max
Glyma.07G050800 5.0kb downstream 5.0kb downstream 9633 true Chr07: 4384147-4393779 Glycine max
Glyma.07G050800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 4388780-4393779 Glycine max
Glyma.07G050800 10.0kb upstream 10.0kb upstream 14633 true Chr07: 4374147-4388779 Glycine max
Glyma.07G050800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 4374147-4384146 Glycine max
Glyma.07G050800 10.0kb downstream 10.0kb downstream 14633 true Chr07: 4384147-4398779 Glycine max
Glyma.07G050800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 4388780-4398779 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304863 5265 Fabidae View MSA
124071715 5270 Rosid View MSA
123753105 5271 Pentapetalae View MSA
122793516 5272 Eudicot View MSA
122042835 5273 Angiosperm View MSA
121351537 5274 Embryophyte View MSA
123382213 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.18013 0.0 4.2264   Low
cufflinks 24.4398 0.0 78.6078 High High
cufflinks 3.14842 0.0 10.7461    
cufflinks 2.5345 0.0 9.18986    
cufflinks 12.8181 0.0 38.2841    
cufflinks 6.68305 0.0 23.2829    
cufflinks 16.3876 0.0 57.4329   High
cufflinks 3.14392 0.0 12.5615    
cufflinks 7.54045 0.0 25.9726    
cufflinks 6.425        
cufflinks 1.213        
cufflinks 2.836        
cufflinks 9.861     High High
cufflinks 11.976     High High
cufflinks 4.563        
cufflinks 2.896        
cufflinks 0.965       Low
cufflinks 10.481     High High
cufflinks 11.128     High High
cufflinks 2.036        
cufflinks 0.912       Low
cufflinks 2.61        
cufflinks 2.855        
cufflinks 0.561       Low
cufflinks 2.762        
cufflinks 1.363        

0 Strain