Gene : PhHAL.3G429300 P. hallii HAL v2.1

Defline:  (1 of 2) PTHR11349:SF44 - NUCLEOSIDE DIPHOSPHATE KINASE II, CHLOROPLASTIC Genomic Order:  3706
Name:  ? PhHAL.3G429300 Secondary Identifier:  ? PAC:40404295

Sequence Feature Displayer

Ontology Annotation Displayer

17 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PhalliiHAL PWY0-162 Panicum hallii HAL pathologic  
PhalliiHAL PWY-7176 Panicum hallii HAL pathologic  
PhalliiHAL PWY-7184 Panicum hallii HAL pathologic  
PhalliiHAL PWY-7196 Panicum hallii HAL pathologic  
PhalliiHAL PWY-7197 Panicum hallii HAL pathologic  
PhalliiHAL PWY-7200 Panicum hallii HAL pathologic  
PhalliiHAL PWY-7205 Panicum hallii HAL pathologic  
PhalliiHAL PWY-7208 Panicum hallii HAL pathologic  
PhalliiHAL PWY-7210 Panicum hallii HAL pathologic  
PhalliiHAL PWY-7211 Panicum hallii HAL pathologic  
PhalliiHAL PWY-7221 Panicum hallii HAL pathologic  
PhalliiHAL PWY-7224 Panicum hallii HAL pathologic  
PhalliiHAL PWY-7226 Panicum hallii HAL pathologic  
PhalliiHAL PWY-7227 Panicum hallii HAL pathologic  
PhalliiHAL PWY-7228 Panicum hallii HAL pathologic  
PhalliiHAL PWY-7229 Panicum hallii HAL pathologic  
PhalliiHAL PWY-841 Panicum hallii HAL pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.3G429300 0.5kb upstream 0.5kb upstream 4256 true Chr03: 53432288-53436543 Panicum hallii HAL
PhHAL.3G429300 0.5kb upstream 0.5kb upstream 500 false Chr03: 53432288-53432787 Panicum hallii HAL
PhHAL.3G429300 0.5kb downstream 0.5kb downstream 4256 true Chr03: 53432788-53437043 Panicum hallii HAL
PhHAL.3G429300 0.5kb downstream 0.5kb downstream 500 false Chr03: 53436544-53437043 Panicum hallii HAL
PhHAL.3G429300 1.0kb upstream 1.0kb upstream 4756 true Chr03: 53431788-53436543 Panicum hallii HAL
PhHAL.3G429300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 53431788-53432787 Panicum hallii HAL
PhHAL.3G429300 1.0kb downstream 1.0kb downstream 4756 true Chr03: 53432788-53437543 Panicum hallii HAL
PhHAL.3G429300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 53436544-53437543 Panicum hallii HAL
PhHAL.3G429300 2.0kb upstream 2.0kb upstream 5756 true Chr03: 53430788-53436543 Panicum hallii HAL
PhHAL.3G429300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 53430788-53432787 Panicum hallii HAL
PhHAL.3G429300 2.0kb downstream 2.0kb downstream 5756 true Chr03: 53432788-53438543 Panicum hallii HAL
PhHAL.3G429300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 53436544-53438543 Panicum hallii HAL
PhHAL.3G429300 5.0kb upstream 5.0kb upstream 8756 true Chr03: 53427788-53436543 Panicum hallii HAL
PhHAL.3G429300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 53427788-53432787 Panicum hallii HAL
PhHAL.3G429300 5.0kb downstream 5.0kb downstream 8756 true Chr03: 53432788-53441543 Panicum hallii HAL
PhHAL.3G429300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 53436544-53441543 Panicum hallii HAL
PhHAL.3G429300 10.0kb upstream 10.0kb upstream 13756 true Chr03: 53422788-53436543 Panicum hallii HAL
PhHAL.3G429300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 53422788-53432787 Panicum hallii HAL
PhHAL.3G429300 10.0kb downstream 10.0kb downstream 13756 true Chr03: 53432788-53446543 Panicum hallii HAL
PhHAL.3G429300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 53436544-53446543 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195967 5267 Panicoideae View MSA
124571700 5269 Grass View MSA
122050213 5273 Angiosperm View MSA
123428962 5275 Viridiplantae View MSA
121346571 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier