Gene : Glyma.07G038500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31238:SF21 - GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 Genomic Order:  385
Name:  ? Glyma.07G038500 Secondary Identifier:  ? PAC:30494730
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G038500 0.5kb upstream 0.5kb upstream 1642 true Chr07: 3182790-3184431 Glycine max
Glyma.07G038500 0.5kb upstream 0.5kb upstream 500 false Chr07: 3182790-3183289 Glycine max
Glyma.07G038500 0.5kb downstream 0.5kb downstream 1642 true Chr07: 3183290-3184931 Glycine max
Glyma.07G038500 0.5kb downstream 0.5kb downstream 500 false Chr07: 3184432-3184931 Glycine max
Glyma.07G038500 1.0kb upstream 1.0kb upstream 2142 true Chr07: 3182290-3184431 Glycine max
Glyma.07G038500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 3182290-3183289 Glycine max
Glyma.07G038500 1.0kb downstream 1.0kb downstream 2142 true Chr07: 3183290-3185431 Glycine max
Glyma.07G038500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 3184432-3185431 Glycine max
Glyma.07G038500 2.0kb upstream 2.0kb upstream 3142 true Chr07: 3181290-3184431 Glycine max
Glyma.07G038500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 3181290-3183289 Glycine max
Glyma.07G038500 2.0kb downstream 2.0kb downstream 3142 true Chr07: 3183290-3186431 Glycine max
Glyma.07G038500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 3184432-3186431 Glycine max
Glyma.07G038500 5.0kb upstream 5.0kb upstream 6142 true Chr07: 3178290-3184431 Glycine max
Glyma.07G038500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 3178290-3183289 Glycine max
Glyma.07G038500 5.0kb downstream 5.0kb downstream 6142 true Chr07: 3183290-3189431 Glycine max
Glyma.07G038500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 3184432-3189431 Glycine max
Glyma.07G038500 10.0kb upstream 10.0kb upstream 11142 true Chr07: 3173290-3184431 Glycine max
Glyma.07G038500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 3173290-3183289 Glycine max
Glyma.07G038500 10.0kb downstream 10.0kb downstream 11142 true Chr07: 3183290-3194431 Glycine max
Glyma.07G038500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 3184432-3194431 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310797 5265 Fabidae View MSA
124066370 5270 Rosid View MSA
123751196 5271 Pentapetalae View MSA
122788614 5272 Eudicot View MSA
122044188 5273 Angiosperm View MSA
121352324 5274 Embryophyte View MSA
123427618 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.6431 0.0 71.4628 High High
cufflinks 1.67019 0.0 5.98512    
cufflinks 1.41544 0.0 5.12435    
cufflinks 0.198353 0.0 0.7852    
cufflinks 0.104475 0.0 0.424415 Low  
cufflinks 0.414179 0.0 1.59402    
cufflinks 3.92495 0.0 12.9243    
cufflinks 0.0954329 0.0 0.388931 Low  
cufflinks 0.072087 0.0 0.298399 Low Low
cufflinks 0.594        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.32        
cufflinks 0.423        
cufflinks 0.027     Low Low
cufflinks 0.016     Low Low
cufflinks 238.902     High High
cufflinks 0.052     Low  
cufflinks 2.965        
cufflinks 1.778        
cufflinks 225.423     High High
cufflinks 0.058     Low  
cufflinks 207.696     High High
cufflinks 161.587     High High
cufflinks 0.018     Low Low
cufflinks 156.643     High High
cufflinks 0.013     Low Low

0 Strain