Gene : PhHAL.4G006500 P. hallii HAL v2.1
Defline:  (1 of 1) 4.6.1.16 - tRNA-intron lyase / tRNA splicing endonuclease Genomic Order:  57
Name:  ? PhHAL.4G006500 Secondary Identifier:  ? PAC:40421265
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PhalliiHAL PWY-6689 Panicum hallii HAL pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.4G006500 0.5kb upstream 0.5kb upstream 3111 true Chr04: 415004-418114 Panicum hallii HAL
PhHAL.4G006500 0.5kb upstream 0.5kb upstream 500 false Chr04: 415004-415503 Panicum hallii HAL
PhHAL.4G006500 0.5kb downstream 0.5kb downstream 3111 true Chr04: 415504-418614 Panicum hallii HAL
PhHAL.4G006500 0.5kb downstream 0.5kb downstream 500 false Chr04: 418115-418614 Panicum hallii HAL
PhHAL.4G006500 1.0kb upstream 1.0kb upstream 3611 true Chr04: 414504-418114 Panicum hallii HAL
PhHAL.4G006500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 414504-415503 Panicum hallii HAL
PhHAL.4G006500 1.0kb downstream 1.0kb downstream 3611 true Chr04: 415504-419114 Panicum hallii HAL
PhHAL.4G006500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 418115-419114 Panicum hallii HAL
PhHAL.4G006500 2.0kb upstream 2.0kb upstream 4611 true Chr04: 413504-418114 Panicum hallii HAL
PhHAL.4G006500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 413504-415503 Panicum hallii HAL
PhHAL.4G006500 2.0kb downstream 2.0kb downstream 4611 true Chr04: 415504-420114 Panicum hallii HAL
PhHAL.4G006500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 418115-420114 Panicum hallii HAL
PhHAL.4G006500 5.0kb upstream 5.0kb upstream 7611 true Chr04: 410504-418114 Panicum hallii HAL
PhHAL.4G006500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 410504-415503 Panicum hallii HAL
PhHAL.4G006500 5.0kb downstream 5.0kb downstream 7611 true Chr04: 415504-423114 Panicum hallii HAL
PhHAL.4G006500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 418115-423114 Panicum hallii HAL
PhHAL.4G006500 10.0kb upstream 10.0kb upstream 12611 true Chr04: 405504-418114 Panicum hallii HAL
PhHAL.4G006500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 405504-415503 Panicum hallii HAL
PhHAL.4G006500 10.0kb downstream 10.0kb downstream 12611 true Chr04: 415504-428114 Panicum hallii HAL
PhHAL.4G006500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 418115-428114 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041240 5273 Angiosperm View MSA
122175925 5267 Panicoideae View MSA
124584479 5269 Grass View MSA
123429143 5275 Viridiplantae View MSA
121344093 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier