Gene : Glyma.07G069400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10799:SF577 - PROTEIN TAF-3, ISOFORM A Genomic Order:  694
Name:  ? Glyma.07G069400 Secondary Identifier:  ? PAC:30493274
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G069400 0.5kb upstream 0.5kb upstream 13412 true Chr07: 6270176-6283587 Glycine max
Glyma.07G069400 0.5kb upstream 0.5kb upstream 500 false Chr07: 6283088-6283587 Glycine max
Glyma.07G069400 0.5kb downstream 0.5kb downstream 13412 true Chr07: 6269676-6283087 Glycine max
Glyma.07G069400 0.5kb downstream 0.5kb downstream 500 false Chr07: 6269676-6270175 Glycine max
Glyma.07G069400 1.0kb upstream 1.0kb upstream 13912 true Chr07: 6270176-6284087 Glycine max
Glyma.07G069400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 6283088-6284087 Glycine max
Glyma.07G069400 1.0kb downstream 1.0kb downstream 13912 true Chr07: 6269176-6283087 Glycine max
Glyma.07G069400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 6269176-6270175 Glycine max
Glyma.07G069400 2.0kb upstream 2.0kb upstream 14912 true Chr07: 6270176-6285087 Glycine max
Glyma.07G069400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 6283088-6285087 Glycine max
Glyma.07G069400 2.0kb downstream 2.0kb downstream 14912 true Chr07: 6268176-6283087 Glycine max
Glyma.07G069400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 6268176-6270175 Glycine max
Glyma.07G069400 5.0kb upstream 5.0kb upstream 17912 true Chr07: 6270176-6288087 Glycine max
Glyma.07G069400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 6283088-6288087 Glycine max
Glyma.07G069400 5.0kb downstream 5.0kb downstream 17912 true Chr07: 6265176-6283087 Glycine max
Glyma.07G069400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 6265176-6270175 Glycine max
Glyma.07G069400 10.0kb upstream 10.0kb upstream 22912 true Chr07: 6270176-6293087 Glycine max
Glyma.07G069400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 6283088-6293087 Glycine max
Glyma.07G069400 10.0kb downstream 10.0kb downstream 22912 true Chr07: 6260176-6283087 Glycine max
Glyma.07G069400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 6260176-6270175 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304569 5265 Fabidae View MSA
124061210 5270 Rosid View MSA
123746200 5271 Pentapetalae View MSA
122788143 5272 Eudicot View MSA
122044493 5273 Angiosperm View MSA
121349128 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.49145 0.0 20.2824    
cufflinks 4.96874 0.0 17.9441    
cufflinks 3.49135 0.0 12.3325    
cufflinks 6.214 0.0 22.9809    
cufflinks 3.12978 0.0 11.1879   Low
cufflinks 2.516 0.0 7.57485   Low
cufflinks 8.70707 0.0 28.6003   High
cufflinks 4.26345 0.0 15.1476    
cufflinks 5.35174 0.0 19.2949    
cufflinks 1.21       Low
cufflinks 1.059       Low
cufflinks 2.363        
cufflinks 1.467        
cufflinks 1.207       Low
cufflinks 1.731        
cufflinks 2.647        
cufflinks 1.688        
cufflinks 3.733       High
cufflinks 3.106       High
cufflinks 2.759        
cufflinks 1.027       Low
cufflinks 3.175       High
cufflinks 2.474        
cufflinks 1.114       Low
cufflinks 2.553        
cufflinks 1.393        

0 Strain