Gene : Glyma.07G064600 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR20881:SF0 - 3-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE Genomic Order:  646
Name:  ? Glyma.07G064600 Secondary Identifier:  ? PAC:30493011
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PANTO-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G064600 0.5kb upstream 0.5kb upstream 3475 true Chr07: 5769056-5772530 Glycine max
Glyma.07G064600 0.5kb upstream 0.5kb upstream 500 false Chr07: 5772031-5772530 Glycine max
Glyma.07G064600 0.5kb downstream 0.5kb downstream 3475 true Chr07: 5768556-5772030 Glycine max
Glyma.07G064600 0.5kb downstream 0.5kb downstream 500 false Chr07: 5768556-5769055 Glycine max
Glyma.07G064600 1.0kb upstream 1.0kb upstream 3975 true Chr07: 5769056-5773030 Glycine max
Glyma.07G064600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 5772031-5773030 Glycine max
Glyma.07G064600 1.0kb downstream 1.0kb downstream 3975 true Chr07: 5768056-5772030 Glycine max
Glyma.07G064600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 5768056-5769055 Glycine max
Glyma.07G064600 2.0kb upstream 2.0kb upstream 4975 true Chr07: 5769056-5774030 Glycine max
Glyma.07G064600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 5772031-5774030 Glycine max
Glyma.07G064600 2.0kb downstream 2.0kb downstream 4975 true Chr07: 5767056-5772030 Glycine max
Glyma.07G064600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 5767056-5769055 Glycine max
Glyma.07G064600 5.0kb upstream 5.0kb upstream 7975 true Chr07: 5769056-5777030 Glycine max
Glyma.07G064600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 5772031-5777030 Glycine max
Glyma.07G064600 5.0kb downstream 5.0kb downstream 7975 true Chr07: 5764056-5772030 Glycine max
Glyma.07G064600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 5764056-5769055 Glycine max
Glyma.07G064600 10.0kb upstream 10.0kb upstream 12975 true Chr07: 5769056-5782030 Glycine max
Glyma.07G064600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 5772031-5782030 Glycine max
Glyma.07G064600 10.0kb downstream 10.0kb downstream 12975 true Chr07: 5759056-5772030 Glycine max
Glyma.07G064600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 5759056-5769055 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301613 5265 Fabidae View MSA
124063716 5270 Rosid View MSA
123736873 5271 Pentapetalae View MSA
122793216 5272 Eudicot View MSA
122047605 5273 Angiosperm View MSA
121346037 5274 Embryophyte View MSA
123424122 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.76527 0.0 34.3528   High
cufflinks 2.11639 0.0 9.83936    
cufflinks 0.899042 0.0 5.10375    
cufflinks 0.459573 0.0 2.87841   Low
cufflinks 1.47464 0.0 10.3905    
cufflinks 0.804243 0.0 3.60561    
cufflinks 0.790225 0.0 10.0749    
cufflinks 1.76966 0.0 6.61996    
cufflinks 1.1148 0.0 9.84671    
cufflinks 0.366        
cufflinks 0.219        
cufflinks 0.134       Low
cufflinks 0.358        
cufflinks 0.246        
cufflinks 0.588       High
cufflinks 0.194        
cufflinks 0.513       High
cufflinks 0.245        
cufflinks 0.459        
cufflinks 0.15       Low
cufflinks 0.34        
cufflinks 0.254        
cufflinks 0.366        
cufflinks 0.717       High
cufflinks 0.159       Low
cufflinks 0.265        

0 Strain