Gene : PhHAL.4G077800 P. hallii HAL v2.1
Defline:  (1 of 1) K06001 - tryptophan synthase beta chain (trpB) Genomic Order:  747
Name:  ? PhHAL.4G077800 Secondary Identifier:  ? PAC:40420121
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PhalliiHAL PWY-4161 Panicum hallii HAL pathologic  
PhalliiHAL PWY-6949 Panicum hallii HAL pathologic  
PhalliiHAL TRPSYN-PWY Panicum hallii HAL pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.4G077800 0.5kb upstream 0.5kb upstream 3842 true Chr04: 5216653-5220494 Panicum hallii HAL
PhHAL.4G077800 0.5kb upstream 0.5kb upstream 500 false Chr04: 5216653-5217152 Panicum hallii HAL
PhHAL.4G077800 0.5kb downstream 0.5kb downstream 3842 true Chr04: 5217153-5220994 Panicum hallii HAL
PhHAL.4G077800 0.5kb downstream 0.5kb downstream 500 false Chr04: 5220495-5220994 Panicum hallii HAL
PhHAL.4G077800 1.0kb upstream 1.0kb upstream 4342 true Chr04: 5216153-5220494 Panicum hallii HAL
PhHAL.4G077800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 5216153-5217152 Panicum hallii HAL
PhHAL.4G077800 1.0kb downstream 1.0kb downstream 4342 true Chr04: 5217153-5221494 Panicum hallii HAL
PhHAL.4G077800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 5220495-5221494 Panicum hallii HAL
PhHAL.4G077800 2.0kb upstream 2.0kb upstream 5342 true Chr04: 5215153-5220494 Panicum hallii HAL
PhHAL.4G077800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 5215153-5217152 Panicum hallii HAL
PhHAL.4G077800 2.0kb downstream 2.0kb downstream 5342 true Chr04: 5217153-5222494 Panicum hallii HAL
PhHAL.4G077800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 5220495-5222494 Panicum hallii HAL
PhHAL.4G077800 5.0kb upstream 5.0kb upstream 8342 true Chr04: 5212153-5220494 Panicum hallii HAL
PhHAL.4G077800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 5212153-5217152 Panicum hallii HAL
PhHAL.4G077800 5.0kb downstream 5.0kb downstream 8342 true Chr04: 5217153-5225494 Panicum hallii HAL
PhHAL.4G077800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 5220495-5225494 Panicum hallii HAL
PhHAL.4G077800 10.0kb upstream 10.0kb upstream 13342 true Chr04: 5207153-5220494 Panicum hallii HAL
PhHAL.4G077800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 5207153-5217152 Panicum hallii HAL
PhHAL.4G077800 10.0kb downstream 10.0kb downstream 13342 true Chr04: 5217153-5230494 Panicum hallii HAL
PhHAL.4G077800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 5220495-5230494 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180601 5267 Panicoideae View MSA
124571287 5269 Grass View MSA
122043348 5273 Angiosperm View MSA
121348084 5274 Embryophyte View MSA
123380724 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier