Gene : Glyma.07G054500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13950:SF9 - RABCONNECTIN-3A Genomic Order:  545
Name:  ? Glyma.07G054500 Secondary Identifier:  ? PAC:30492363
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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G054500 0.5kb upstream 0.5kb upstream 17053 true Chr07: 4770102-4787154 Glycine max
Glyma.07G054500 0.5kb upstream 0.5kb upstream 500 false Chr07: 4770102-4770601 Glycine max
Glyma.07G054500 0.5kb downstream 0.5kb downstream 17053 true Chr07: 4770602-4787654 Glycine max
Glyma.07G054500 0.5kb downstream 0.5kb downstream 500 false Chr07: 4787155-4787654 Glycine max
Glyma.07G054500 1.0kb upstream 1.0kb upstream 17553 true Chr07: 4769602-4787154 Glycine max
Glyma.07G054500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 4769602-4770601 Glycine max
Glyma.07G054500 1.0kb downstream 1.0kb downstream 17553 true Chr07: 4770602-4788154 Glycine max
Glyma.07G054500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 4787155-4788154 Glycine max
Glyma.07G054500 2.0kb upstream 2.0kb upstream 18553 true Chr07: 4768602-4787154 Glycine max
Glyma.07G054500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 4768602-4770601 Glycine max
Glyma.07G054500 2.0kb downstream 2.0kb downstream 18553 true Chr07: 4770602-4789154 Glycine max
Glyma.07G054500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 4787155-4789154 Glycine max
Glyma.07G054500 5.0kb upstream 5.0kb upstream 21553 true Chr07: 4765602-4787154 Glycine max
Glyma.07G054500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 4765602-4770601 Glycine max
Glyma.07G054500 5.0kb downstream 5.0kb downstream 21553 true Chr07: 4770602-4792154 Glycine max
Glyma.07G054500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 4787155-4792154 Glycine max
Glyma.07G054500 10.0kb upstream 10.0kb upstream 26553 true Chr07: 4760602-4787154 Glycine max
Glyma.07G054500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 4760602-4770601 Glycine max
Glyma.07G054500 10.0kb downstream 10.0kb downstream 26553 true Chr07: 4770602-4797154 Glycine max
Glyma.07G054500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 4787155-4797154 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304149 5265 Fabidae View MSA
124050248 5270 Rosid View MSA
123750499 5271 Pentapetalae View MSA
122789349 5272 Eudicot View MSA
122049710 5273 Angiosperm View MSA
121345516 5274 Embryophyte View MSA
123380232 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.25844 0.0 19.7823    
cufflinks 4.36111 0.0 11.645    
cufflinks 7.27135 0.0 19.8726    
cufflinks 6.68996 0.0 18.1517    
cufflinks 5.72784 0.0 15.3996    
cufflinks 2.90821 0.0 7.78721   Low
cufflinks 6.89188 0.0 18.6995    
cufflinks 5.70613 0.0 15.3514    
cufflinks 4.90506 0.0 13.1272    
cufflinks 3.505        
cufflinks 2.948        
cufflinks 3.782        
cufflinks 3.501        
cufflinks 4.268       High
cufflinks 3.682        
cufflinks 3.359        
cufflinks 1.73       Low
cufflinks 4.467       High
cufflinks 4.578       High
cufflinks 3.641        
cufflinks 3.021        
cufflinks 3.786        
cufflinks 2.992        
cufflinks 3.203        
cufflinks 3.613        
cufflinks 3.125        

0 Strain