Gene : Glyma.07G057200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11177:SF167 - RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC Genomic Order:  572
Name:  ? Glyma.07G057200 Secondary Identifier:  ? PAC:30493620
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G057200 0.5kb upstream 0.5kb upstream 6409 true Chr07: 5077505-5083913 Glycine max
Glyma.07G057200 0.5kb upstream 0.5kb upstream 500 false Chr07: 5077505-5078004 Glycine max
Glyma.07G057200 0.5kb downstream 0.5kb downstream 6409 true Chr07: 5078005-5084413 Glycine max
Glyma.07G057200 0.5kb downstream 0.5kb downstream 500 false Chr07: 5083914-5084413 Glycine max
Glyma.07G057200 1.0kb upstream 1.0kb upstream 6909 true Chr07: 5077005-5083913 Glycine max
Glyma.07G057200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 5077005-5078004 Glycine max
Glyma.07G057200 1.0kb downstream 1.0kb downstream 6909 true Chr07: 5078005-5084913 Glycine max
Glyma.07G057200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 5083914-5084913 Glycine max
Glyma.07G057200 2.0kb upstream 2.0kb upstream 7909 true Chr07: 5076005-5083913 Glycine max
Glyma.07G057200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 5076005-5078004 Glycine max
Glyma.07G057200 2.0kb downstream 2.0kb downstream 7909 true Chr07: 5078005-5085913 Glycine max
Glyma.07G057200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 5083914-5085913 Glycine max
Glyma.07G057200 5.0kb upstream 5.0kb upstream 10909 true Chr07: 5073005-5083913 Glycine max
Glyma.07G057200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 5073005-5078004 Glycine max
Glyma.07G057200 5.0kb downstream 5.0kb downstream 10909 true Chr07: 5078005-5088913 Glycine max
Glyma.07G057200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 5083914-5088913 Glycine max
Glyma.07G057200 10.0kb upstream 10.0kb upstream 15909 true Chr07: 5068005-5083913 Glycine max
Glyma.07G057200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 5068005-5078004 Glycine max
Glyma.07G057200 10.0kb downstream 10.0kb downstream 15909 true Chr07: 5078005-5093913 Glycine max
Glyma.07G057200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 5083914-5093913 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304218 5265 Fabidae View MSA
124066431 5270 Rosid View MSA
123750921 5271 Pentapetalae View MSA
122791613 5272 Eudicot View MSA
122044286 5273 Angiosperm View MSA
121344422 5274 Embryophyte View MSA
123425945 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.3956 0.0 54.6544   High
cufflinks 34.7994 0.0 96.3028 High High
cufflinks 3.2728 0.0 9.77172    
cufflinks 12.2449 0.0 32.7346    
cufflinks 3.98217 0.0 11.6182    
cufflinks 3.35643 0.0 10.0016    
cufflinks 14.8226 0.0 39.546    
cufflinks 6.74106 0.0 18.5619    
cufflinks 1.60973 0.0 5.31921   Low
cufflinks 9.189     High  
cufflinks 0.058       Low
cufflinks 4.608        
cufflinks 0.553        
cufflinks 0.507        
cufflinks 0.038     Low Low
cufflinks 46.903     High High
cufflinks 0.157        
cufflinks 7.57     High  
cufflinks 15.084     High  
cufflinks 41.829     High High
cufflinks 0.092       Low
cufflinks 41.307     High High
cufflinks 38.334     High High
cufflinks 0.044     Low Low
cufflinks 45.877     High High
cufflinks 0.143        

0 Strain