Gene : Glyma.07G058600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR22536 - LUNG CANCER METASTASIS-RELATED LCMR1 PROTEIN Genomic Order:  586
Name:  ? Glyma.07G058600 Secondary Identifier:  ? PAC:30495528
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G058600 0.5kb upstream 0.5kb upstream 6630 true Chr07: 5240996-5247625 Glycine max
Glyma.07G058600 0.5kb upstream 0.5kb upstream 500 false Chr07: 5247126-5247625 Glycine max
Glyma.07G058600 0.5kb downstream 0.5kb downstream 6630 true Chr07: 5240496-5247125 Glycine max
Glyma.07G058600 0.5kb downstream 0.5kb downstream 500 false Chr07: 5240496-5240995 Glycine max
Glyma.07G058600 1.0kb upstream 1.0kb upstream 7130 true Chr07: 5240996-5248125 Glycine max
Glyma.07G058600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 5247126-5248125 Glycine max
Glyma.07G058600 1.0kb downstream 1.0kb downstream 7130 true Chr07: 5239996-5247125 Glycine max
Glyma.07G058600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 5239996-5240995 Glycine max
Glyma.07G058600 2.0kb upstream 2.0kb upstream 8130 true Chr07: 5240996-5249125 Glycine max
Glyma.07G058600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 5247126-5249125 Glycine max
Glyma.07G058600 2.0kb downstream 2.0kb downstream 8130 true Chr07: 5238996-5247125 Glycine max
Glyma.07G058600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 5238996-5240995 Glycine max
Glyma.07G058600 5.0kb upstream 5.0kb upstream 11130 true Chr07: 5240996-5252125 Glycine max
Glyma.07G058600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 5247126-5252125 Glycine max
Glyma.07G058600 5.0kb downstream 5.0kb downstream 11130 true Chr07: 5235996-5247125 Glycine max
Glyma.07G058600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 5235996-5240995 Glycine max
Glyma.07G058600 10.0kb upstream 10.0kb upstream 16130 true Chr07: 5240996-5257125 Glycine max
Glyma.07G058600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 5247126-5257125 Glycine max
Glyma.07G058600 10.0kb downstream 10.0kb downstream 16130 true Chr07: 5230996-5247125 Glycine max
Glyma.07G058600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 5230996-5240995 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312705 5265 Fabidae View MSA
124074053 5270 Rosid View MSA
123743720 5271 Pentapetalae View MSA
122789289 5272 Eudicot View MSA
122041858 5273 Angiosperm View MSA
121345817 5274 Embryophyte View MSA
123425736 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.04812 0.0 24.0957   High
cufflinks 5.28185 0.0 20.9994    
cufflinks 4.68354 0.0 20.1232    
cufflinks 3.98156 0.0 14.5848   Low
cufflinks 4.53492 0.0 19.6967    
cufflinks 5.31005 0.0 18.6668    
cufflinks 3.71604 0.0 14.3281   Low
cufflinks 5.67875 0.0 22.9974    
cufflinks 6.1288 0.0 20.7285   High
cufflinks 0.696       Low
cufflinks 1.359        
cufflinks 0.98        
cufflinks 1.237        
cufflinks 1.124        
cufflinks 1.559        
cufflinks 2.713       High
cufflinks 0.999        
cufflinks 1.026        
cufflinks 0.851       Low
cufflinks 3.107       High
cufflinks 1.534        
cufflinks 2.421       High
cufflinks 1.282        
cufflinks 1.677        
cufflinks 2.634       High
cufflinks 1.406        

0 Strain