Gene : Glyma.07G058800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23416:SF2 - SERINE ACETYLTRANSFERASE 5 Genomic Order:  588
Name:  ? Glyma.07G058800 Secondary Identifier:  ? PAC:30495520
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax CYSTSYN-PWY Glycine max pathologic  
Gmax PWY-6936 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G058800 0.5kb upstream 0.5kb upstream 2120 true Chr07: 5264281-5266400 Glycine max
Glyma.07G058800 0.5kb upstream 0.5kb upstream 500 false Chr07: 5264281-5264780 Glycine max
Glyma.07G058800 0.5kb downstream 0.5kb downstream 2120 true Chr07: 5264781-5266900 Glycine max
Glyma.07G058800 0.5kb downstream 0.5kb downstream 500 false Chr07: 5266401-5266900 Glycine max
Glyma.07G058800 1.0kb upstream 1.0kb upstream 2620 true Chr07: 5263781-5266400 Glycine max
Glyma.07G058800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 5263781-5264780 Glycine max
Glyma.07G058800 1.0kb downstream 1.0kb downstream 2620 true Chr07: 5264781-5267400 Glycine max
Glyma.07G058800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 5266401-5267400 Glycine max
Glyma.07G058800 2.0kb upstream 2.0kb upstream 3620 true Chr07: 5262781-5266400 Glycine max
Glyma.07G058800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 5262781-5264780 Glycine max
Glyma.07G058800 2.0kb downstream 2.0kb downstream 3620 true Chr07: 5264781-5268400 Glycine max
Glyma.07G058800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 5266401-5268400 Glycine max
Glyma.07G058800 5.0kb upstream 5.0kb upstream 6620 true Chr07: 5259781-5266400 Glycine max
Glyma.07G058800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 5259781-5264780 Glycine max
Glyma.07G058800 5.0kb downstream 5.0kb downstream 6620 true Chr07: 5264781-5271400 Glycine max
Glyma.07G058800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 5266401-5271400 Glycine max
Glyma.07G058800 10.0kb upstream 10.0kb upstream 11620 true Chr07: 5254781-5266400 Glycine max
Glyma.07G058800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 5254781-5264780 Glycine max
Glyma.07G058800 10.0kb downstream 10.0kb downstream 11620 true Chr07: 5264781-5276400 Glycine max
Glyma.07G058800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 5266401-5276400 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309116 5265 Fabidae View MSA
124068098 5270 Rosid View MSA
123738273 5271 Pentapetalae View MSA
122789751 5272 Eudicot View MSA
122047158 5273 Angiosperm View MSA
121348374 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.06531 0.0 3.87939    
cufflinks 0.145542 0.0 0.579943 Low Low
cufflinks 1.01235 0.0 3.71846    
cufflinks 0.262967 0.0 1.02476    
cufflinks 1.1984 0.0 4.31393    
cufflinks 7.64096 0.0 22.2833   High
cufflinks 0.404414 0.0 1.54111    
cufflinks 0.18679 0.0 0.73708 Low Low
cufflinks 1.85675 0.0 6.50156    
cufflinks 0.072     Low Low
cufflinks 8.133     High High
cufflinks 0.32        
cufflinks 0.479        
cufflinks 0.833        
cufflinks 4.863        
cufflinks 0.208        
cufflinks 8.249     High High
cufflinks 0.202        
cufflinks 0.272        
cufflinks 0.031     Low Low
cufflinks 48.679     High High
cufflinks 0.069     Low Low
cufflinks 0.172        
cufflinks 9.293     High High
cufflinks 0.064     Low Low
cufflinks 25.77     High High

0 Strain