Gene : Glyma.07G107400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31421:SF0 - PROTEIN BASIC PENTACYSTEINE1-RELATED Genomic Order:  1074
Name:  ? Glyma.07G107400 Secondary Identifier:  ? PAC:30495544
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G107400 0.5kb upstream 0.5kb upstream 2323 true Chr07: 10483507-10485829 Glycine max
Glyma.07G107400 0.5kb upstream 0.5kb upstream 500 false Chr07: 10485330-10485829 Glycine max
Glyma.07G107400 0.5kb downstream 0.5kb downstream 2323 true Chr07: 10483007-10485329 Glycine max
Glyma.07G107400 0.5kb downstream 0.5kb downstream 500 false Chr07: 10483007-10483506 Glycine max
Glyma.07G107400 1.0kb upstream 1.0kb upstream 2823 true Chr07: 10483507-10486329 Glycine max
Glyma.07G107400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 10485330-10486329 Glycine max
Glyma.07G107400 1.0kb downstream 1.0kb downstream 2823 true Chr07: 10482507-10485329 Glycine max
Glyma.07G107400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 10482507-10483506 Glycine max
Glyma.07G107400 2.0kb upstream 2.0kb upstream 3823 true Chr07: 10483507-10487329 Glycine max
Glyma.07G107400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 10485330-10487329 Glycine max
Glyma.07G107400 2.0kb downstream 2.0kb downstream 3823 true Chr07: 10481507-10485329 Glycine max
Glyma.07G107400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 10481507-10483506 Glycine max
Glyma.07G107400 5.0kb upstream 5.0kb upstream 6823 true Chr07: 10483507-10490329 Glycine max
Glyma.07G107400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 10485330-10490329 Glycine max
Glyma.07G107400 5.0kb downstream 5.0kb downstream 6823 true Chr07: 10478507-10485329 Glycine max
Glyma.07G107400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 10478507-10483506 Glycine max
Glyma.07G107400 10.0kb upstream 10.0kb upstream 11823 true Chr07: 10483507-10495329 Glycine max
Glyma.07G107400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 10485330-10495329 Glycine max
Glyma.07G107400 10.0kb downstream 10.0kb downstream 11823 true Chr07: 10473507-10485329 Glycine max
Glyma.07G107400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 10473507-10483506 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254958 5265 Fabidae View MSA
124070545 5270 Rosid View MSA
123750720 5271 Pentapetalae View MSA
122788133 5272 Eudicot View MSA
122049801 5273 Angiosperm View MSA
121311594 5274 Embryophyte View MSA
123348870 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.97481 0.0 24.5934   Low
cufflinks 22.5386 0.0 78.278 High High
cufflinks 10.6347 0.0 39.5552    
cufflinks 9.05821 0.0 35.0241    
cufflinks 10.1255 0.0 38.2826    
cufflinks 12.6424 0.0 46.2324    
cufflinks 25.0362 0.0 86.8933 High High
cufflinks 10.1788 0.0 38.2521    
cufflinks 10.1384 0.0 38.1991    
cufflinks 4.147       Low
cufflinks 4.041       Low
cufflinks 4.742        
cufflinks 4.205       Low
cufflinks 5.105        
cufflinks 5.715     High  
cufflinks 7.113        
cufflinks 5.974        
cufflinks 5.493        
cufflinks 10.163     High High
cufflinks 6.376        
cufflinks 3.823       Low
cufflinks 7.264     High  
cufflinks 7.753     High High
cufflinks 5.667        
cufflinks 6.717        
cufflinks 6.639     High  

0 Strain