Gene : Glyma.07G107800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10366:SF242 - STEROL-4-ALPHA-CARBOXYLATE 3-DEHYDROGENASE, DECARBOXYLATING Genomic Order:  1078
Name:  ? Glyma.07G107800 Secondary Identifier:  ? PAC:30492020
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G107800 0.5kb upstream 0.5kb upstream 6518 true Chr07: 10580908-10587425 Glycine max
Glyma.07G107800 0.5kb upstream 0.5kb upstream 500 false Chr07: 10586926-10587425 Glycine max
Glyma.07G107800 0.5kb downstream 0.5kb downstream 6518 true Chr07: 10580408-10586925 Glycine max
Glyma.07G107800 0.5kb downstream 0.5kb downstream 500 false Chr07: 10580408-10580907 Glycine max
Glyma.07G107800 1.0kb upstream 1.0kb upstream 7018 true Chr07: 10580908-10587925 Glycine max
Glyma.07G107800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 10586926-10587925 Glycine max
Glyma.07G107800 1.0kb downstream 1.0kb downstream 7018 true Chr07: 10579908-10586925 Glycine max
Glyma.07G107800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 10579908-10580907 Glycine max
Glyma.07G107800 2.0kb upstream 2.0kb upstream 8018 true Chr07: 10580908-10588925 Glycine max
Glyma.07G107800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 10586926-10588925 Glycine max
Glyma.07G107800 2.0kb downstream 2.0kb downstream 8018 true Chr07: 10578908-10586925 Glycine max
Glyma.07G107800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 10578908-10580907 Glycine max
Glyma.07G107800 5.0kb upstream 5.0kb upstream 11018 true Chr07: 10580908-10591925 Glycine max
Glyma.07G107800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 10586926-10591925 Glycine max
Glyma.07G107800 5.0kb downstream 5.0kb downstream 11018 true Chr07: 10575908-10586925 Glycine max
Glyma.07G107800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 10575908-10580907 Glycine max
Glyma.07G107800 10.0kb upstream 10.0kb upstream 16018 true Chr07: 10580908-10596925 Glycine max
Glyma.07G107800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 10586926-10596925 Glycine max
Glyma.07G107800 10.0kb downstream 10.0kb downstream 16018 true Chr07: 10570908-10586925 Glycine max
Glyma.07G107800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 10570908-10580907 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306528 5265 Fabidae View MSA
124064993 5270 Rosid View MSA
123743534 5271 Pentapetalae View MSA
122791319 5272 Eudicot View MSA
122044485 5273 Angiosperm View MSA
121347416 5274 Embryophyte View MSA
123427810 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.09855 0.0 11.9707   Low
cufflinks 7.8081 0.0 21.3486    
cufflinks 3.60954 0.0 10.7054   Low
cufflinks 7.76829 0.0 21.2385    
cufflinks 14.7876 0.0 39.4565   High
cufflinks 8.20267 0.0 22.3395    
cufflinks 7.41137 0.0 20.3409    
cufflinks 7.08903 0.0 19.512    
cufflinks 8.25909 0.0 22.4835    
cufflinks 3.909        
cufflinks 0.33       Low
cufflinks 2.114        
cufflinks 6.686       High
cufflinks 8.212     High High
cufflinks 0.884        
cufflinks 2.41        
cufflinks 1.566        
cufflinks 3.483        
cufflinks 3.984        
cufflinks 2.066        
cufflinks 0.667       Low
cufflinks 2.154        
cufflinks 2.913        
cufflinks 0.483       Low
cufflinks 2.222        
cufflinks 0.965        

0 Strain