Gene : Glyma.07G107900 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR21229:SF1 - PROTEIN C52B9.4 Genomic Order:  1079
Name:  ? Glyma.07G107900 Secondary Identifier:  ? PAC:30495021
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G107900 0.5kb upstream 0.5kb upstream 4463 true Chr07: 10601617-10606079 Glycine max
Glyma.07G107900 0.5kb upstream 0.5kb upstream 500 false Chr07: 10601617-10602116 Glycine max
Glyma.07G107900 0.5kb downstream 0.5kb downstream 4463 true Chr07: 10602117-10606579 Glycine max
Glyma.07G107900 0.5kb downstream 0.5kb downstream 500 false Chr07: 10606080-10606579 Glycine max
Glyma.07G107900 1.0kb upstream 1.0kb upstream 4963 true Chr07: 10601117-10606079 Glycine max
Glyma.07G107900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 10601117-10602116 Glycine max
Glyma.07G107900 1.0kb downstream 1.0kb downstream 4963 true Chr07: 10602117-10607079 Glycine max
Glyma.07G107900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 10606080-10607079 Glycine max
Glyma.07G107900 2.0kb upstream 2.0kb upstream 5963 true Chr07: 10600117-10606079 Glycine max
Glyma.07G107900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 10600117-10602116 Glycine max
Glyma.07G107900 2.0kb downstream 2.0kb downstream 5963 true Chr07: 10602117-10608079 Glycine max
Glyma.07G107900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 10606080-10608079 Glycine max
Glyma.07G107900 5.0kb upstream 5.0kb upstream 8963 true Chr07: 10597117-10606079 Glycine max
Glyma.07G107900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 10597117-10602116 Glycine max
Glyma.07G107900 5.0kb downstream 5.0kb downstream 8963 true Chr07: 10602117-10611079 Glycine max
Glyma.07G107900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 10606080-10611079 Glycine max
Glyma.07G107900 10.0kb upstream 10.0kb upstream 13963 true Chr07: 10592117-10606079 Glycine max
Glyma.07G107900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 10592117-10602116 Glycine max
Glyma.07G107900 10.0kb downstream 10.0kb downstream 13963 true Chr07: 10602117-10616079 Glycine max
Glyma.07G107900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 10606080-10616079 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026531 5273 Angiosperm View MSA
122311724 5265 Fabidae View MSA
124065573 5270 Rosid View MSA
123740547 5271 Pentapetalae View MSA
122786010 5272 Eudicot View MSA
121348761 5274 Embryophyte View MSA
123425075 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.908 0.0 31.8942   Low
cufflinks 18.5577 0.0 49.5651    
cufflinks 17.7407 0.0 47.3533    
cufflinks 34.479 0.0 94.9743 High High
cufflinks 21.6801 0.0 58.199 High  
cufflinks 14.1859 0.0 37.8612    
cufflinks 48.3575 0.0 138.372 High High
cufflinks 24.2156 0.0 65.222 High  
cufflinks 20.2112 0.0 54.1075 High  
cufflinks 7.024        
cufflinks 2.431       Low
cufflinks 8.268     High High
cufflinks 7.641     High High
cufflinks 7.762     High High
cufflinks 3.349        
cufflinks 3.974        
cufflinks 2.3       Low
cufflinks 8.525     High High
cufflinks 7.995     High High
cufflinks 3.738        
cufflinks 3.35        
cufflinks 3.706        
cufflinks 3.063        
cufflinks 3.542        
cufflinks 3.652        
cufflinks 4.32        

0 Strain