Gene : Glyma.07G085400 G. max Wm82.a2.v1
Defline:  (1 of 2) 6.3.4.19 - tRNA(Ile)-lysidine synthetase / Isoleucine-specific transfer ribonucleate lysidine synthetase Genomic Order:  854
Name:  ? Glyma.07G085400 Secondary Identifier:  ? PAC:30494046
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G085400 0.5kb upstream 0.5kb upstream 6478 true Chr07: 7870356-7876833 Glycine max
Glyma.07G085400 0.5kb upstream 0.5kb upstream 500 false Chr07: 7876334-7876833 Glycine max
Glyma.07G085400 0.5kb downstream 0.5kb downstream 6478 true Chr07: 7869856-7876333 Glycine max
Glyma.07G085400 0.5kb downstream 0.5kb downstream 500 false Chr07: 7869856-7870355 Glycine max
Glyma.07G085400 1.0kb upstream 1.0kb upstream 6978 true Chr07: 7870356-7877333 Glycine max
Glyma.07G085400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 7876334-7877333 Glycine max
Glyma.07G085400 1.0kb downstream 1.0kb downstream 6978 true Chr07: 7869356-7876333 Glycine max
Glyma.07G085400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 7869356-7870355 Glycine max
Glyma.07G085400 2.0kb upstream 2.0kb upstream 7978 true Chr07: 7870356-7878333 Glycine max
Glyma.07G085400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 7876334-7878333 Glycine max
Glyma.07G085400 2.0kb downstream 2.0kb downstream 7978 true Chr07: 7868356-7876333 Glycine max
Glyma.07G085400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 7868356-7870355 Glycine max
Glyma.07G085400 5.0kb upstream 5.0kb upstream 10978 true Chr07: 7870356-7881333 Glycine max
Glyma.07G085400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 7876334-7881333 Glycine max
Glyma.07G085400 5.0kb downstream 5.0kb downstream 10978 true Chr07: 7865356-7876333 Glycine max
Glyma.07G085400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 7865356-7870355 Glycine max
Glyma.07G085400 10.0kb upstream 10.0kb upstream 15978 true Chr07: 7870356-7886333 Glycine max
Glyma.07G085400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 7876334-7886333 Glycine max
Glyma.07G085400 10.0kb downstream 10.0kb downstream 15978 true Chr07: 7860356-7876333 Glycine max
Glyma.07G085400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 7860356-7870355 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026304 5273 Angiosperm View MSA
122302066 5265 Fabidae View MSA
124063792 5270 Rosid View MSA
123738903 5271 Pentapetalae View MSA
122792916 5272 Eudicot View MSA
121345916 5274 Embryophyte View MSA
123380288 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.37193 0.0 7.44775   High
cufflinks 1.30361 0.0 5.96502   High
cufflinks 0.795962 0.0 5.00577    
cufflinks 0.88366 0.0 4.52193    
cufflinks 0.775694 0.0 4.11758    
cufflinks 0.287059 0.0 1.39426 Low Low
cufflinks 0.792141 0.0 4.18306    
cufflinks 1.03574 0.0 5.11498    
cufflinks 0.734513 0.0 3.92852    
cufflinks 0.168        
cufflinks 0.028     Low Low
cufflinks 0.209        
cufflinks 0.117        
cufflinks 0.159        
cufflinks 0.065        
cufflinks 0.201        
cufflinks 0.098        
cufflinks 0.302       High
cufflinks 0.318       High
cufflinks 0.22        
cufflinks 0.035     Low Low
cufflinks 0.241        
cufflinks 0.324       High
cufflinks 0.024     Low Low
cufflinks 0.217        
cufflinks 0.052     Low  

0 Strain