Gene : Glyma.07G086300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10015:SF187 - HEAT STRESS TRANSCRIPTION FACTOR C-1 Genomic Order:  863
Name:  ? Glyma.07G086300 Secondary Identifier:  ? PAC:30494799
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G086300 0.5kb upstream 0.5kb upstream 1683 true Chr07: 7997334-7999016 Glycine max
Glyma.07G086300 0.5kb upstream 0.5kb upstream 500 false Chr07: 7998517-7999016 Glycine max
Glyma.07G086300 0.5kb downstream 0.5kb downstream 1683 true Chr07: 7996834-7998516 Glycine max
Glyma.07G086300 0.5kb downstream 0.5kb downstream 500 false Chr07: 7996834-7997333 Glycine max
Glyma.07G086300 1.0kb upstream 1.0kb upstream 2183 true Chr07: 7997334-7999516 Glycine max
Glyma.07G086300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 7998517-7999516 Glycine max
Glyma.07G086300 1.0kb downstream 1.0kb downstream 2183 true Chr07: 7996334-7998516 Glycine max
Glyma.07G086300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 7996334-7997333 Glycine max
Glyma.07G086300 2.0kb upstream 2.0kb upstream 3183 true Chr07: 7997334-8000516 Glycine max
Glyma.07G086300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 7998517-8000516 Glycine max
Glyma.07G086300 2.0kb downstream 2.0kb downstream 3183 true Chr07: 7995334-7998516 Glycine max
Glyma.07G086300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 7995334-7997333 Glycine max
Glyma.07G086300 5.0kb upstream 5.0kb upstream 6183 true Chr07: 7997334-8003516 Glycine max
Glyma.07G086300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 7998517-8003516 Glycine max
Glyma.07G086300 5.0kb downstream 5.0kb downstream 6183 true Chr07: 7992334-7998516 Glycine max
Glyma.07G086300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 7992334-7997333 Glycine max
Glyma.07G086300 10.0kb upstream 10.0kb upstream 11183 true Chr07: 7997334-8008516 Glycine max
Glyma.07G086300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 7998517-8008516 Glycine max
Glyma.07G086300 10.0kb downstream 10.0kb downstream 11183 true Chr07: 7987334-7998516 Glycine max
Glyma.07G086300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 7987334-7997333 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313698 5265 Fabidae View MSA
124074457 5270 Rosid View MSA
123749561 5271 Pentapetalae View MSA
122794562 5272 Eudicot View MSA
122050286 5273 Angiosperm View MSA
121349623 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.0477 0.0 56.4477    
cufflinks 6.70023 0.0 24.8524    
cufflinks 4.64814 0.0 17.5486    
cufflinks 8.97901 0.0 32.7259    
cufflinks 8.28149 0.0 30.2301    
cufflinks 58.9818 0.0 176.596 High High
cufflinks 4.79944 0.0 18.0335    
cufflinks 30.5836 0.0 98.4238 High High
cufflinks 3.03023 0.0 11.6261   Low
cufflinks 0.779        
cufflinks 0.031     Low Low
cufflinks 0.354        
cufflinks 0.463        
cufflinks 0.129        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.709        
cufflinks 0.33        
cufflinks 0.354        
cufflinks 0.211        
cufflinks 0.631        
cufflinks 0.127        
cufflinks 0.781        
cufflinks 1.077       High
cufflinks 0.048     Low Low
cufflinks 0.448        
cufflinks 0.065     Low Low

0 Strain