Gene : Glyma.07G087300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR33168:SF12 - EXPRESSED PROTEIN Genomic Order:  873
Name:  ? Glyma.07G087300 Secondary Identifier:  ? PAC:30493266
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G087300 0.5kb upstream 0.5kb upstream 1176 true Chr07: 8067210-8068385 Glycine max
Glyma.07G087300 0.5kb upstream 0.5kb upstream 500 false Chr07: 8067210-8067709 Glycine max
Glyma.07G087300 0.5kb downstream 0.5kb downstream 1176 true Chr07: 8067710-8068885 Glycine max
Glyma.07G087300 0.5kb downstream 0.5kb downstream 500 false Chr07: 8068386-8068885 Glycine max
Glyma.07G087300 1.0kb upstream 1.0kb upstream 1676 true Chr07: 8066710-8068385 Glycine max
Glyma.07G087300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 8066710-8067709 Glycine max
Glyma.07G087300 1.0kb downstream 1.0kb downstream 1676 true Chr07: 8067710-8069385 Glycine max
Glyma.07G087300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 8068386-8069385 Glycine max
Glyma.07G087300 2.0kb upstream 2.0kb upstream 2676 true Chr07: 8065710-8068385 Glycine max
Glyma.07G087300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 8065710-8067709 Glycine max
Glyma.07G087300 2.0kb downstream 2.0kb downstream 2676 true Chr07: 8067710-8070385 Glycine max
Glyma.07G087300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 8068386-8070385 Glycine max
Glyma.07G087300 5.0kb upstream 5.0kb upstream 5676 true Chr07: 8062710-8068385 Glycine max
Glyma.07G087300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 8062710-8067709 Glycine max
Glyma.07G087300 5.0kb downstream 5.0kb downstream 5676 true Chr07: 8067710-8073385 Glycine max
Glyma.07G087300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 8068386-8073385 Glycine max
Glyma.07G087300 10.0kb upstream 10.0kb upstream 10676 true Chr07: 8057710-8068385 Glycine max
Glyma.07G087300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 8057710-8067709 Glycine max
Glyma.07G087300 10.0kb downstream 10.0kb downstream 10676 true Chr07: 8067710-8078385 Glycine max
Glyma.07G087300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 8068386-8078385 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254191 5265 Fabidae View MSA
124074176 5270 Rosid View MSA
123744638 5271 Pentapetalae View MSA
122795740 5272 Eudicot View MSA
122048464 5273 Angiosperm View MSA
121310979 5274 Embryophyte View MSA
123348342 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0813105 0.0 0.346504 Low  
cufflinks 0.0382252 0.0 0.173352 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.886617 0.0 3.3715    
cufflinks 0.601392 0.0 2.32673    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.16669 0.0 4.37637    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 5.998     High High
cufflinks 0.146        
cufflinks 1.095        
cufflinks 5.244       High
cufflinks 4.276       High
cufflinks 0.03     Low Low
cufflinks 0.231        
cufflinks 0.502        
cufflinks 0.017     Low Low
cufflinks 0.104        
cufflinks 2.574        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.055     Low  
cufflinks 4.208       High
cufflinks 0.033     Low Low
cufflinks 0.885        

0 Strain