Gene : Glyma.07G087700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11361:SF31 - DNA MISMATCH REPAIR PROTEIN MSH6 Genomic Order:  877
Name:  ? Glyma.07G087700 Secondary Identifier:  ? PAC:30492503
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G087700 0.5kb upstream 0.5kb upstream 9803 true Chr07: 8111251-8121053 Glycine max
Glyma.07G087700 0.5kb upstream 0.5kb upstream 500 false Chr07: 8111251-8111750 Glycine max
Glyma.07G087700 0.5kb downstream 0.5kb downstream 9803 true Chr07: 8111751-8121553 Glycine max
Glyma.07G087700 0.5kb downstream 0.5kb downstream 500 false Chr07: 8121054-8121553 Glycine max
Glyma.07G087700 1.0kb upstream 1.0kb upstream 10303 true Chr07: 8110751-8121053 Glycine max
Glyma.07G087700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 8110751-8111750 Glycine max
Glyma.07G087700 1.0kb downstream 1.0kb downstream 10303 true Chr07: 8111751-8122053 Glycine max
Glyma.07G087700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 8121054-8122053 Glycine max
Glyma.07G087700 2.0kb upstream 2.0kb upstream 11303 true Chr07: 8109751-8121053 Glycine max
Glyma.07G087700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 8109751-8111750 Glycine max
Glyma.07G087700 2.0kb downstream 2.0kb downstream 11303 true Chr07: 8111751-8123053 Glycine max
Glyma.07G087700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 8121054-8123053 Glycine max
Glyma.07G087700 5.0kb upstream 5.0kb upstream 14303 true Chr07: 8106751-8121053 Glycine max
Glyma.07G087700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 8106751-8111750 Glycine max
Glyma.07G087700 5.0kb downstream 5.0kb downstream 14303 true Chr07: 8111751-8126053 Glycine max
Glyma.07G087700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 8121054-8126053 Glycine max
Glyma.07G087700 10.0kb upstream 10.0kb upstream 19303 true Chr07: 8101751-8121053 Glycine max
Glyma.07G087700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 8101751-8111750 Glycine max
Glyma.07G087700 10.0kb downstream 10.0kb downstream 19303 true Chr07: 8111751-8131053 Glycine max
Glyma.07G087700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 8121054-8131053 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046363 5273 Angiosperm View MSA
122304312 5265 Fabidae View MSA
124065685 5270 Rosid View MSA
123748625 5271 Pentapetalae View MSA
122788803 5272 Eudicot View MSA
121344642 5274 Embryophyte View MSA
123426480 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.130429 0.0 0.495066 Low Low
cufflinks 3.68471 0.0 10.1597   High
cufflinks 0.346042 0.0 1.24768    
cufflinks 0.658864 0.0 2.25564    
cufflinks 0.854309 0.0 2.83697    
cufflinks 0.820629 0.0 2.7359    
cufflinks 1.03057 0.0 3.34572    
cufflinks 0.684907 0.0 2.33365    
cufflinks 1.82361 0.0 5.44221    
cufflinks 0.248        
cufflinks 0.041     Low Low
cufflinks 0.523        
cufflinks 0.745        
cufflinks 0.864        
cufflinks 0.112        
cufflinks 0.563        
cufflinks 0.157        
cufflinks 0.381        
cufflinks 2.17       High
cufflinks 0.37        
cufflinks 0.079       Low
cufflinks 0.423        
cufflinks 1.403       High
cufflinks 0.093       Low
cufflinks 0.394        
cufflinks 0.158        

0 Strain