Gene : PhHAL.5G354000 P. hallii HAL v2.1

Defline:  (1 of 1) PTHR13622//PTHR13622:SF6 - THIAMIN PYROPHOSPHOKINASE // SUBFAMILY NOT NAMED Genomic Order:  3081
Name:  ? PhHAL.5G354000 Secondary Identifier:  ? PAC:40426281

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PhalliiHAL PWY-6908 Panicum hallii HAL pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.5G354000 0.5kb upstream 0.5kb upstream 6272 true Chr05: 38338280-38344551 Panicum hallii HAL
PhHAL.5G354000 0.5kb upstream 0.5kb upstream 500 false Chr05: 38344052-38344551 Panicum hallii HAL
PhHAL.5G354000 0.5kb downstream 0.5kb downstream 6272 true Chr05: 38337780-38344051 Panicum hallii HAL
PhHAL.5G354000 0.5kb downstream 0.5kb downstream 500 false Chr05: 38337780-38338279 Panicum hallii HAL
PhHAL.5G354000 1.0kb upstream 1.0kb upstream 6772 true Chr05: 38338280-38345051 Panicum hallii HAL
PhHAL.5G354000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38344052-38345051 Panicum hallii HAL
PhHAL.5G354000 1.0kb downstream 1.0kb downstream 6772 true Chr05: 38337280-38344051 Panicum hallii HAL
PhHAL.5G354000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38337280-38338279 Panicum hallii HAL
PhHAL.5G354000 2.0kb upstream 2.0kb upstream 7772 true Chr05: 38338280-38346051 Panicum hallii HAL
PhHAL.5G354000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38344052-38346051 Panicum hallii HAL
PhHAL.5G354000 2.0kb downstream 2.0kb downstream 7772 true Chr05: 38336280-38344051 Panicum hallii HAL
PhHAL.5G354000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38336280-38338279 Panicum hallii HAL
PhHAL.5G354000 5.0kb upstream 5.0kb upstream 10772 true Chr05: 38338280-38349051 Panicum hallii HAL
PhHAL.5G354000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38344052-38349051 Panicum hallii HAL
PhHAL.5G354000 5.0kb downstream 5.0kb downstream 10772 true Chr05: 38333280-38344051 Panicum hallii HAL
PhHAL.5G354000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38333280-38338279 Panicum hallii HAL
PhHAL.5G354000 10.0kb upstream 10.0kb upstream 15772 true Chr05: 38338280-38354051 Panicum hallii HAL
PhHAL.5G354000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38344052-38354051 Panicum hallii HAL
PhHAL.5G354000 10.0kb downstream 10.0kb downstream 15772 true Chr05: 38328280-38344051 Panicum hallii HAL
PhHAL.5G354000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38328280-38338279 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189565 5267 Panicoideae View MSA
124575442 5269 Grass View MSA
122046316 5273 Angiosperm View MSA
121345006 5274 Embryophyte View MSA
123424730 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier