Gene : PhHAL.5G508000 P. hallii HAL v2.1

Defline:  (1 of 9) PF13426 - PAS domain (PAS_9) Genomic Order:  4394
Name:  ? PhHAL.5G508000 Secondary Identifier:  ? PAC:40424802

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.5G508000 0.5kb upstream 0.5kb upstream 4210 true Chr05: 56990498-56994707 Panicum hallii HAL
PhHAL.5G508000 0.5kb upstream 0.5kb upstream 500 false Chr05: 56994208-56994707 Panicum hallii HAL
PhHAL.5G508000 0.5kb downstream 0.5kb downstream 4210 true Chr05: 56989998-56994207 Panicum hallii HAL
PhHAL.5G508000 0.5kb downstream 0.5kb downstream 500 false Chr05: 56989998-56990497 Panicum hallii HAL
PhHAL.5G508000 1.0kb upstream 1.0kb upstream 4710 true Chr05: 56990498-56995207 Panicum hallii HAL
PhHAL.5G508000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 56994208-56995207 Panicum hallii HAL
PhHAL.5G508000 1.0kb downstream 1.0kb downstream 4710 true Chr05: 56989498-56994207 Panicum hallii HAL
PhHAL.5G508000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 56989498-56990497 Panicum hallii HAL
PhHAL.5G508000 2.0kb upstream 2.0kb upstream 5710 true Chr05: 56990498-56996207 Panicum hallii HAL
PhHAL.5G508000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 56994208-56996207 Panicum hallii HAL
PhHAL.5G508000 2.0kb downstream 2.0kb downstream 5710 true Chr05: 56988498-56994207 Panicum hallii HAL
PhHAL.5G508000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 56988498-56990497 Panicum hallii HAL
PhHAL.5G508000 5.0kb upstream 5.0kb upstream 8710 true Chr05: 56990498-56999207 Panicum hallii HAL
PhHAL.5G508000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 56994208-56999207 Panicum hallii HAL
PhHAL.5G508000 5.0kb downstream 5.0kb downstream 8710 true Chr05: 56985498-56994207 Panicum hallii HAL
PhHAL.5G508000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 56985498-56990497 Panicum hallii HAL
PhHAL.5G508000 10.0kb upstream 10.0kb upstream 13710 true Chr05: 56990498-57004207 Panicum hallii HAL
PhHAL.5G508000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 56994208-57004207 Panicum hallii HAL
PhHAL.5G508000 10.0kb downstream 10.0kb downstream 13710 true Chr05: 56980498-56994207 Panicum hallii HAL
PhHAL.5G508000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 56980498-56990497 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179675 5267 Panicoideae View MSA
124576216 5269 Grass View MSA
122045856 5273 Angiosperm View MSA
121348460 5274 Embryophyte View MSA
123424929 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier