Gene : Glyma.07G134100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11709:SF62 - LACCASE-2 Genomic Order:  1341
Name:  ? Glyma.07G134100 Secondary Identifier:  ? PAC:30495338
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5466 Glycine max pathologic  
Gmax PWY-6824 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G134100 0.5kb upstream 0.5kb upstream 3712 true Chr07: 15880168-15883879 Glycine max
Glyma.07G134100 0.5kb upstream 0.5kb upstream 500 false Chr07: 15883380-15883879 Glycine max
Glyma.07G134100 0.5kb downstream 0.5kb downstream 3712 true Chr07: 15879668-15883379 Glycine max
Glyma.07G134100 0.5kb downstream 0.5kb downstream 500 false Chr07: 15879668-15880167 Glycine max
Glyma.07G134100 1.0kb upstream 1.0kb upstream 4212 true Chr07: 15880168-15884379 Glycine max
Glyma.07G134100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 15883380-15884379 Glycine max
Glyma.07G134100 1.0kb downstream 1.0kb downstream 4212 true Chr07: 15879168-15883379 Glycine max
Glyma.07G134100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 15879168-15880167 Glycine max
Glyma.07G134100 2.0kb upstream 2.0kb upstream 5212 true Chr07: 15880168-15885379 Glycine max
Glyma.07G134100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 15883380-15885379 Glycine max
Glyma.07G134100 2.0kb downstream 2.0kb downstream 5212 true Chr07: 15878168-15883379 Glycine max
Glyma.07G134100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 15878168-15880167 Glycine max
Glyma.07G134100 5.0kb upstream 5.0kb upstream 8212 true Chr07: 15880168-15888379 Glycine max
Glyma.07G134100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 15883380-15888379 Glycine max
Glyma.07G134100 5.0kb downstream 5.0kb downstream 8212 true Chr07: 15875168-15883379 Glycine max
Glyma.07G134100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 15875168-15880167 Glycine max
Glyma.07G134100 10.0kb upstream 10.0kb upstream 13212 true Chr07: 15880168-15893379 Glycine max
Glyma.07G134100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 15883380-15893379 Glycine max
Glyma.07G134100 10.0kb downstream 10.0kb downstream 13212 true Chr07: 15870168-15883379 Glycine max
Glyma.07G134100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 15870168-15880167 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301895 5265 Fabidae View MSA
124070693 5270 Rosid View MSA
123751220 5271 Pentapetalae View MSA
122795105 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.8128 0.0 8.56414    
cufflinks 0.6382 0.0 2.84459    
cufflinks 0.561806 0.0 3.393    
cufflinks 54.1044 0.0 233.462 High High
cufflinks 3.15592 0.0 12.034    
cufflinks 0.567372 0.0 2.53133    
cufflinks 0.11769 0.0 0.459042 Low Low
cufflinks 36.4604 0.0 142.519 High High
cufflinks 4.29812 0.0 14.9912    
cufflinks 10.24     High High
cufflinks 0.113        
cufflinks 0.092     Low  
cufflinks 1.374       High
cufflinks 0.243        
cufflinks 0.015     Low Low
cufflinks 0.26        
cufflinks 1.362       High
cufflinks 0.302        
cufflinks 0.51        
cufflinks 0.196        
cufflinks 0.32        
cufflinks 0.293        
cufflinks 0.099     Low  
cufflinks 0.205        
cufflinks 0.242        
cufflinks 0.296        

0 Strain