Gene : Glyma.07G124300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12866:SF5 - UBIQUITIN-LIKE-CONJUGATING ENZYME ATG10 Genomic Order:  1243
Name:  ? Glyma.07G124300 Secondary Identifier:  ? PAC:30492760
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G124300 0.5kb upstream 0.5kb upstream 4025 true Chr07: 14744239-14748263 Glycine max
Glyma.07G124300 0.5kb upstream 0.5kb upstream 500 false Chr07: 14747764-14748263 Glycine max
Glyma.07G124300 0.5kb downstream 0.5kb downstream 4025 true Chr07: 14743739-14747763 Glycine max
Glyma.07G124300 0.5kb downstream 0.5kb downstream 500 false Chr07: 14743739-14744238 Glycine max
Glyma.07G124300 1.0kb upstream 1.0kb upstream 4525 true Chr07: 14744239-14748763 Glycine max
Glyma.07G124300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 14747764-14748763 Glycine max
Glyma.07G124300 1.0kb downstream 1.0kb downstream 4525 true Chr07: 14743239-14747763 Glycine max
Glyma.07G124300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 14743239-14744238 Glycine max
Glyma.07G124300 2.0kb upstream 2.0kb upstream 5525 true Chr07: 14744239-14749763 Glycine max
Glyma.07G124300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 14747764-14749763 Glycine max
Glyma.07G124300 2.0kb downstream 2.0kb downstream 5525 true Chr07: 14742239-14747763 Glycine max
Glyma.07G124300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 14742239-14744238 Glycine max
Glyma.07G124300 5.0kb upstream 5.0kb upstream 8525 true Chr07: 14744239-14752763 Glycine max
Glyma.07G124300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 14747764-14752763 Glycine max
Glyma.07G124300 5.0kb downstream 5.0kb downstream 8525 true Chr07: 14739239-14747763 Glycine max
Glyma.07G124300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 14739239-14744238 Glycine max
Glyma.07G124300 10.0kb upstream 10.0kb upstream 13525 true Chr07: 14744239-14757763 Glycine max
Glyma.07G124300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 14747764-14757763 Glycine max
Glyma.07G124300 10.0kb downstream 10.0kb downstream 13525 true Chr07: 14734239-14747763 Glycine max
Glyma.07G124300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 14734239-14744238 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299798 5265 Fabidae View MSA
124065951 5270 Rosid View MSA
123738819 5271 Pentapetalae View MSA
122789693 5272 Eudicot View MSA
122045044 5273 Angiosperm View MSA
121344822 5274 Embryophyte View MSA
123380107 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.95665 0.0 21.1191    
cufflinks 3.2986 0.0 18.1464    
cufflinks 4.94272 0.0 28.2286   High
cufflinks 2.92951 0.0 19.8973    
cufflinks 3.13591 0.0 17.5369    
cufflinks 3.89445 0.0 24.4458    
cufflinks 1.98283 0.0 12.4205   Low
cufflinks 2.72335 0.0 16.1412    
cufflinks 3.92244 0.0 23.934    
cufflinks 1.502       High
cufflinks 0.671        
cufflinks 0.858        
cufflinks 0.398       Low
cufflinks 0.316       Low
cufflinks 0.707        
cufflinks 0.433        
cufflinks 0.922        
cufflinks 0.771        
cufflinks 0.864        
cufflinks 0.362       Low
cufflinks 0.599        
cufflinks 0.411        
cufflinks 1.547       High
cufflinks 0.783        
cufflinks 0.384       Low
cufflinks 1.011        

0 Strain