Gene : PhHAL.5G436500 P. hallii HAL v2.1

Defline:  (1 of 1) K13152 - U11/U12 small nuclear ribonucleoprotein 20 kDa protein (ZMAT5) Genomic Order:  3693
Name:  ? PhHAL.5G436500 Secondary Identifier:  ? PAC:40429405

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.5G436500 0.5kb upstream 0.5kb upstream 3614 true Chr05: 52480759-52484372 Panicum hallii HAL
PhHAL.5G436500 0.5kb upstream 0.5kb upstream 500 false Chr05: 52483873-52484372 Panicum hallii HAL
PhHAL.5G436500 0.5kb downstream 0.5kb downstream 3614 true Chr05: 52480259-52483872 Panicum hallii HAL
PhHAL.5G436500 0.5kb downstream 0.5kb downstream 500 false Chr05: 52480259-52480758 Panicum hallii HAL
PhHAL.5G436500 1.0kb upstream 1.0kb upstream 4114 true Chr05: 52480759-52484872 Panicum hallii HAL
PhHAL.5G436500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 52483873-52484872 Panicum hallii HAL
PhHAL.5G436500 1.0kb downstream 1.0kb downstream 4114 true Chr05: 52479759-52483872 Panicum hallii HAL
PhHAL.5G436500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 52479759-52480758 Panicum hallii HAL
PhHAL.5G436500 2.0kb upstream 2.0kb upstream 5114 true Chr05: 52480759-52485872 Panicum hallii HAL
PhHAL.5G436500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 52483873-52485872 Panicum hallii HAL
PhHAL.5G436500 2.0kb downstream 2.0kb downstream 5114 true Chr05: 52478759-52483872 Panicum hallii HAL
PhHAL.5G436500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 52478759-52480758 Panicum hallii HAL
PhHAL.5G436500 5.0kb upstream 5.0kb upstream 8114 true Chr05: 52480759-52488872 Panicum hallii HAL
PhHAL.5G436500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 52483873-52488872 Panicum hallii HAL
PhHAL.5G436500 5.0kb downstream 5.0kb downstream 8114 true Chr05: 52475759-52483872 Panicum hallii HAL
PhHAL.5G436500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 52475759-52480758 Panicum hallii HAL
PhHAL.5G436500 10.0kb upstream 10.0kb upstream 13114 true Chr05: 52480759-52493872 Panicum hallii HAL
PhHAL.5G436500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 52483873-52493872 Panicum hallii HAL
PhHAL.5G436500 10.0kb downstream 10.0kb downstream 13114 true Chr05: 52470759-52483872 Panicum hallii HAL
PhHAL.5G436500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 52470759-52480758 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177978 5267 Panicoideae View MSA
124570849 5269 Grass View MSA
122049396 5273 Angiosperm View MSA
121346346 5274 Embryophyte View MSA
123380370 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier