Gene : PhHAL.5G439800 P. hallii HAL v2.1

Defline:  (1 of 1) PTHR22835//PTHR22835:SF207 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3726
Name:  ? PhHAL.5G439800 Secondary Identifier:  ? PAC:40426205

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PhalliiHAL LIPAS-PWY Panicum hallii HAL pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.5G439800 0.5kb upstream 0.5kb upstream 2858 true Chr05: 52648640-52651497 Panicum hallii HAL
PhHAL.5G439800 0.5kb upstream 0.5kb upstream 500 false Chr05: 52648640-52649139 Panicum hallii HAL
PhHAL.5G439800 0.5kb downstream 0.5kb downstream 2858 true Chr05: 52649140-52651997 Panicum hallii HAL
PhHAL.5G439800 0.5kb downstream 0.5kb downstream 500 false Chr05: 52651498-52651997 Panicum hallii HAL
PhHAL.5G439800 1.0kb upstream 1.0kb upstream 3358 true Chr05: 52648140-52651497 Panicum hallii HAL
PhHAL.5G439800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 52648140-52649139 Panicum hallii HAL
PhHAL.5G439800 1.0kb downstream 1.0kb downstream 3358 true Chr05: 52649140-52652497 Panicum hallii HAL
PhHAL.5G439800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 52651498-52652497 Panicum hallii HAL
PhHAL.5G439800 2.0kb upstream 2.0kb upstream 4358 true Chr05: 52647140-52651497 Panicum hallii HAL
PhHAL.5G439800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 52647140-52649139 Panicum hallii HAL
PhHAL.5G439800 2.0kb downstream 2.0kb downstream 4358 true Chr05: 52649140-52653497 Panicum hallii HAL
PhHAL.5G439800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 52651498-52653497 Panicum hallii HAL
PhHAL.5G439800 5.0kb upstream 5.0kb upstream 7358 true Chr05: 52644140-52651497 Panicum hallii HAL
PhHAL.5G439800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 52644140-52649139 Panicum hallii HAL
PhHAL.5G439800 5.0kb downstream 5.0kb downstream 7358 true Chr05: 52649140-52656497 Panicum hallii HAL
PhHAL.5G439800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 52651498-52656497 Panicum hallii HAL
PhHAL.5G439800 10.0kb upstream 10.0kb upstream 12358 true Chr05: 52639140-52651497 Panicum hallii HAL
PhHAL.5G439800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 52639140-52649139 Panicum hallii HAL
PhHAL.5G439800 10.0kb downstream 10.0kb downstream 12358 true Chr05: 52649140-52661497 Panicum hallii HAL
PhHAL.5G439800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 52651498-52661497 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180001 5267 Panicoideae View MSA
124585315 5269 Grass View MSA
122042489 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier