Gene : Glyma.07G126800 G. max Wm82.a2.v1
Defline:  (1 of 16) KOG1595 - CCCH-type Zn-finger protein Genomic Order:  1268
Name:  ? Glyma.07G126800 Secondary Identifier:  ? PAC:30492269
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G126800 0.5kb upstream 0.5kb upstream 2276 true Chr07: 15189430-15191705 Glycine max
Glyma.07G126800 0.5kb upstream 0.5kb upstream 500 false Chr07: 15189430-15189929 Glycine max
Glyma.07G126800 0.5kb downstream 0.5kb downstream 2276 true Chr07: 15189930-15192205 Glycine max
Glyma.07G126800 0.5kb downstream 0.5kb downstream 500 false Chr07: 15191706-15192205 Glycine max
Glyma.07G126800 1.0kb upstream 1.0kb upstream 2776 true Chr07: 15188930-15191705 Glycine max
Glyma.07G126800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 15188930-15189929 Glycine max
Glyma.07G126800 1.0kb downstream 1.0kb downstream 2776 true Chr07: 15189930-15192705 Glycine max
Glyma.07G126800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 15191706-15192705 Glycine max
Glyma.07G126800 2.0kb upstream 2.0kb upstream 3776 true Chr07: 15187930-15191705 Glycine max
Glyma.07G126800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 15187930-15189929 Glycine max
Glyma.07G126800 2.0kb downstream 2.0kb downstream 3776 true Chr07: 15189930-15193705 Glycine max
Glyma.07G126800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 15191706-15193705 Glycine max
Glyma.07G126800 5.0kb upstream 5.0kb upstream 6776 true Chr07: 15184930-15191705 Glycine max
Glyma.07G126800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 15184930-15189929 Glycine max
Glyma.07G126800 5.0kb downstream 5.0kb downstream 6776 true Chr07: 15189930-15196705 Glycine max
Glyma.07G126800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 15191706-15196705 Glycine max
Glyma.07G126800 10.0kb upstream 10.0kb upstream 11776 true Chr07: 15179930-15191705 Glycine max
Glyma.07G126800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 15179930-15189929 Glycine max
Glyma.07G126800 10.0kb downstream 10.0kb downstream 11776 true Chr07: 15189930-15201705 Glycine max
Glyma.07G126800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 15191706-15201705 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310889 5265 Fabidae View MSA
124070432 5270 Rosid View MSA
123751061 5271 Pentapetalae View MSA
122788502 5272 Eudicot View MSA
122046777 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.9722 0.0 37.4336    
cufflinks 49.029 0.0 137.043 High High
cufflinks 28.5155 0.0 76.5068 High  
cufflinks 9.78025 0.0 26.7113    
cufflinks 19.0883 0.0 50.941    
cufflinks 5.37306 0.0 15.4741   Low
cufflinks 8.04613 0.0 22.2203    
cufflinks 29.2182 0.0 78.6088 High  
cufflinks 11.9526 0.0 32.2144    
cufflinks 10.276     High  
cufflinks 17.192     High  
cufflinks 15.994     High  
cufflinks 1.8       Low
cufflinks 1.494       Low
cufflinks 146.781     High High
cufflinks 32.875     High  
cufflinks 4.489       Low
cufflinks 8.063     High  
cufflinks 44.522     High  
cufflinks 26.492     High  
cufflinks 19.495     High  
cufflinks 25.677     High  
cufflinks 21.82     High  
cufflinks 11.471     High  
cufflinks 32.535     High  
cufflinks 24.608     High  

0 Strain