Gene : Glyma.07G119200 G. max Wm82.a2.v1
Defline:  (1 of 330) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1192
Name:  ? Glyma.07G119200 Secondary Identifier:  ? PAC:30492290
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G119200 0.5kb upstream 0.5kb upstream 5615 true Chr07: 13613534-13619148 Glycine max
Glyma.07G119200 0.5kb upstream 0.5kb upstream 500 false Chr07: 13618649-13619148 Glycine max
Glyma.07G119200 0.5kb downstream 0.5kb downstream 5615 true Chr07: 13613034-13618648 Glycine max
Glyma.07G119200 0.5kb downstream 0.5kb downstream 500 false Chr07: 13613034-13613533 Glycine max
Glyma.07G119200 1.0kb upstream 1.0kb upstream 6115 true Chr07: 13613534-13619648 Glycine max
Glyma.07G119200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 13618649-13619648 Glycine max
Glyma.07G119200 1.0kb downstream 1.0kb downstream 6115 true Chr07: 13612534-13618648 Glycine max
Glyma.07G119200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 13612534-13613533 Glycine max
Glyma.07G119200 2.0kb upstream 2.0kb upstream 7115 true Chr07: 13613534-13620648 Glycine max
Glyma.07G119200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 13618649-13620648 Glycine max
Glyma.07G119200 2.0kb downstream 2.0kb downstream 7115 true Chr07: 13611534-13618648 Glycine max
Glyma.07G119200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 13611534-13613533 Glycine max
Glyma.07G119200 5.0kb upstream 5.0kb upstream 10115 true Chr07: 13613534-13623648 Glycine max
Glyma.07G119200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 13618649-13623648 Glycine max
Glyma.07G119200 5.0kb downstream 5.0kb downstream 10115 true Chr07: 13608534-13618648 Glycine max
Glyma.07G119200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 13608534-13613533 Glycine max
Glyma.07G119200 10.0kb upstream 10.0kb upstream 15115 true Chr07: 13613534-13628648 Glycine max
Glyma.07G119200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 13618649-13628648 Glycine max
Glyma.07G119200 10.0kb downstream 10.0kb downstream 15115 true Chr07: 13603534-13618648 Glycine max
Glyma.07G119200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 13603534-13613533 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304708 5265 Fabidae View MSA
124062625 5270 Rosid View MSA
123739540 5271 Pentapetalae View MSA
122790225 5272 Eudicot View MSA
122049132 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.6095 0.0 36.3278   High
cufflinks 5.83243 0.0 16.2509    
cufflinks 5.22381 0.0 14.6697    
cufflinks 4.18983 0.0 12.1052    
cufflinks 3.49877 0.0 10.3947    
cufflinks 4.73416 0.0 13.5111    
cufflinks 3.59957 0.0 10.6635    
cufflinks 5.14378 0.0 14.5192    
cufflinks 5.09754 0.0 14.4146    
cufflinks 1.782        
cufflinks 0.476       Low
cufflinks 2.108        
cufflinks 2.039        
cufflinks 2.046        
cufflinks 0.876       Low
cufflinks 4.073       High
cufflinks 1.185        
cufflinks 2.018        
cufflinks 2.99        
cufflinks 3.692        
cufflinks 1.217        
cufflinks 3.884       High
cufflinks 5.839       High
cufflinks 1.047        
cufflinks 4.036       High
cufflinks 0.702       Low

0 Strain