Gene : Glyma.07G170300 G. max Wm82.a2.v1
Defline:  (1 of 13) KOG0114 - Predicted RNA-binding protein (RRM superfamily) Genomic Order:  1703
Name:  ? Glyma.07G170300 Secondary Identifier:  ? PAC:30494697
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G170300 0.5kb upstream 0.5kb upstream 1211 true Chr07: 29349290-29350500 Glycine max
Glyma.07G170300 0.5kb upstream 0.5kb upstream 500 false Chr07: 29349290-29349789 Glycine max
Glyma.07G170300 0.5kb downstream 0.5kb downstream 1211 true Chr07: 29349790-29351000 Glycine max
Glyma.07G170300 0.5kb downstream 0.5kb downstream 500 false Chr07: 29350501-29351000 Glycine max
Glyma.07G170300 1.0kb upstream 1.0kb upstream 1711 true Chr07: 29348790-29350500 Glycine max
Glyma.07G170300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 29348790-29349789 Glycine max
Glyma.07G170300 1.0kb downstream 1.0kb downstream 1711 true Chr07: 29349790-29351500 Glycine max
Glyma.07G170300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 29350501-29351500 Glycine max
Glyma.07G170300 2.0kb upstream 2.0kb upstream 2711 true Chr07: 29347790-29350500 Glycine max
Glyma.07G170300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 29347790-29349789 Glycine max
Glyma.07G170300 2.0kb downstream 2.0kb downstream 2711 true Chr07: 29349790-29352500 Glycine max
Glyma.07G170300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 29350501-29352500 Glycine max
Glyma.07G170300 5.0kb upstream 5.0kb upstream 5711 true Chr07: 29344790-29350500 Glycine max
Glyma.07G170300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 29344790-29349789 Glycine max
Glyma.07G170300 5.0kb downstream 5.0kb downstream 5711 true Chr07: 29349790-29355500 Glycine max
Glyma.07G170300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 29350501-29355500 Glycine max
Glyma.07G170300 10.0kb upstream 10.0kb upstream 10711 true Chr07: 29339790-29350500 Glycine max
Glyma.07G170300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 29339790-29349789 Glycine max
Glyma.07G170300 10.0kb downstream 10.0kb downstream 10711 true Chr07: 29349790-29360500 Glycine max
Glyma.07G170300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 29350501-29360500 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782035 5273 Angiosperm View MSA
122296546 5265 Fabidae View MSA
124040128 5270 Rosid View MSA
123751645 5271 Pentapetalae View MSA
122774115 5272 Eudicot View MSA
121053578 5274 Embryophyte View MSA
123093595 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.43744 0.0 11.6265   High
cufflinks 0.336176 0.0 5.10224   Low
cufflinks 1.36548 0.0 11.8805   High
cufflinks 0.522758 0.0 6.47557    
cufflinks 0.5591 0.0 6.89448    
cufflinks 1.27279 0.0 10.6556    
cufflinks 0.812735 0.0 8.55367    
cufflinks 0.5493 0.0 6.65259    
cufflinks 1.1193 0.0 10.6495    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.056       High
cufflinks 0.047     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.076       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.026     Low  
cufflinks 0.036     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low  
cufflinks 0.025     Low  
cufflinks 0.024     Low  
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low Low
cufflinks 0.024     Low  

0 Strain