Gene : Glyma.07G175200 G. max Wm82.a2.v1

Defline:  (1 of 17) 1.1.1.195 - Cinnamyl-alcohol dehydrogenase / CAD Genomic Order:  1752
Name:  ? Glyma.07G175200 Secondary Identifier:  ? PAC:30494573

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-361 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G175200 0.5kb upstream 0.5kb upstream 2681 true Chr07: 31708738-31711418 Glycine max
Glyma.07G175200 0.5kb upstream 0.5kb upstream 500 false Chr07: 31710919-31711418 Glycine max
Glyma.07G175200 0.5kb downstream 0.5kb downstream 2681 true Chr07: 31708238-31710918 Glycine max
Glyma.07G175200 0.5kb downstream 0.5kb downstream 500 false Chr07: 31708238-31708737 Glycine max
Glyma.07G175200 1.0kb upstream 1.0kb upstream 3181 true Chr07: 31708738-31711918 Glycine max
Glyma.07G175200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 31710919-31711918 Glycine max
Glyma.07G175200 1.0kb downstream 1.0kb downstream 3181 true Chr07: 31707738-31710918 Glycine max
Glyma.07G175200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 31707738-31708737 Glycine max
Glyma.07G175200 2.0kb upstream 2.0kb upstream 4181 true Chr07: 31708738-31712918 Glycine max
Glyma.07G175200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 31710919-31712918 Glycine max
Glyma.07G175200 2.0kb downstream 2.0kb downstream 4181 true Chr07: 31706738-31710918 Glycine max
Glyma.07G175200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 31706738-31708737 Glycine max
Glyma.07G175200 5.0kb upstream 5.0kb upstream 7181 true Chr07: 31708738-31715918 Glycine max
Glyma.07G175200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 31710919-31715918 Glycine max
Glyma.07G175200 5.0kb downstream 5.0kb downstream 7181 true Chr07: 31703738-31710918 Glycine max
Glyma.07G175200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 31703738-31708737 Glycine max
Glyma.07G175200 10.0kb upstream 10.0kb upstream 12181 true Chr07: 31708738-31720918 Glycine max
Glyma.07G175200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 31710919-31720918 Glycine max
Glyma.07G175200 10.0kb downstream 10.0kb downstream 12181 true Chr07: 31698738-31710918 Glycine max
Glyma.07G175200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 31698738-31708737 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313197 5265 Fabidae View MSA
124074573 5270 Rosid View MSA
123753594 5271 Pentapetalae View MSA
122797386 5272 Eudicot View MSA
122050713 5273 Angiosperm View MSA
121350624 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.111029 0.0 0.45347 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain