Gene : Glyma.07G177000 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR31142:SF3 - PROTEIN TOM THREE HOMOLOG 1-RELATED Genomic Order:  1770
Name:  ? Glyma.07G177000 Secondary Identifier:  ? PAC:30493594
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G177000 0.5kb upstream 0.5kb upstream 9405 true Chr07: 33308069-33317473 Glycine max
Glyma.07G177000 0.5kb upstream 0.5kb upstream 500 false Chr07: 33308069-33308568 Glycine max
Glyma.07G177000 0.5kb downstream 0.5kb downstream 9405 true Chr07: 33308569-33317973 Glycine max
Glyma.07G177000 0.5kb downstream 0.5kb downstream 500 false Chr07: 33317474-33317973 Glycine max
Glyma.07G177000 1.0kb upstream 1.0kb upstream 9905 true Chr07: 33307569-33317473 Glycine max
Glyma.07G177000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 33307569-33308568 Glycine max
Glyma.07G177000 1.0kb downstream 1.0kb downstream 9905 true Chr07: 33308569-33318473 Glycine max
Glyma.07G177000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 33317474-33318473 Glycine max
Glyma.07G177000 2.0kb upstream 2.0kb upstream 10905 true Chr07: 33306569-33317473 Glycine max
Glyma.07G177000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 33306569-33308568 Glycine max
Glyma.07G177000 2.0kb downstream 2.0kb downstream 10905 true Chr07: 33308569-33319473 Glycine max
Glyma.07G177000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 33317474-33319473 Glycine max
Glyma.07G177000 5.0kb upstream 5.0kb upstream 13905 true Chr07: 33303569-33317473 Glycine max
Glyma.07G177000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 33303569-33308568 Glycine max
Glyma.07G177000 5.0kb downstream 5.0kb downstream 13905 true Chr07: 33308569-33322473 Glycine max
Glyma.07G177000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 33317474-33322473 Glycine max
Glyma.07G177000 10.0kb upstream 10.0kb upstream 18905 true Chr07: 33298569-33317473 Glycine max
Glyma.07G177000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 33298569-33308568 Glycine max
Glyma.07G177000 10.0kb downstream 10.0kb downstream 18905 true Chr07: 33308569-33327473 Glycine max
Glyma.07G177000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 33317474-33327473 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311267 5265 Fabidae View MSA
124070535 5270 Rosid View MSA
123753465 5271 Pentapetalae View MSA
122796045 5272 Eudicot View MSA
122049721 5273 Angiosperm View MSA
121345693 5274 Embryophyte View MSA
123426001 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.3681 0.0 34.0155    
cufflinks 15.2755 0.0 41.4277    
cufflinks 12.7965 0.0 35.1041    
cufflinks 13.0153 0.0 35.6696    
cufflinks 15.6056 0.0 42.2344    
cufflinks 17.4645 0.0 47.0015   High
cufflinks 18.4222 0.0 49.5137   High
cufflinks 13.5507 0.0 37.0335    
cufflinks 11.8059 0.0 32.5517   Low
cufflinks 1.122        
cufflinks 0.984        
cufflinks 1.279        
cufflinks 1.394       High
cufflinks 1.478       High
cufflinks 0.846       Low
cufflinks 1.129        
cufflinks 0.86       Low
cufflinks 1.377       High
cufflinks 1.658       High
cufflinks 1.112        
cufflinks 1.047        
cufflinks 1.032        
cufflinks 1.097        
cufflinks 1.278        
cufflinks 1.018        
cufflinks 0.929       Low

0 Strain