Gene : Glyma.07G151200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR35499:SF2 - ALC-INTERACTING PROTEIN 1 Genomic Order:  1512
Name:  ? Glyma.07G151200 Secondary Identifier:  ? PAC:30493258
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G151200 0.5kb upstream 0.5kb upstream 2584 true Chr07: 18333780-18336363 Glycine max
Glyma.07G151200 0.5kb upstream 0.5kb upstream 500 false Chr07: 18335864-18336363 Glycine max
Glyma.07G151200 0.5kb downstream 0.5kb downstream 2584 true Chr07: 18333280-18335863 Glycine max
Glyma.07G151200 0.5kb downstream 0.5kb downstream 500 false Chr07: 18333280-18333779 Glycine max
Glyma.07G151200 1.0kb upstream 1.0kb upstream 3084 true Chr07: 18333780-18336863 Glycine max
Glyma.07G151200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 18335864-18336863 Glycine max
Glyma.07G151200 1.0kb downstream 1.0kb downstream 3084 true Chr07: 18332780-18335863 Glycine max
Glyma.07G151200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 18332780-18333779 Glycine max
Glyma.07G151200 2.0kb upstream 2.0kb upstream 4084 true Chr07: 18333780-18337863 Glycine max
Glyma.07G151200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 18335864-18337863 Glycine max
Glyma.07G151200 2.0kb downstream 2.0kb downstream 4084 true Chr07: 18331780-18335863 Glycine max
Glyma.07G151200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 18331780-18333779 Glycine max
Glyma.07G151200 5.0kb upstream 5.0kb upstream 7084 true Chr07: 18333780-18340863 Glycine max
Glyma.07G151200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 18335864-18340863 Glycine max
Glyma.07G151200 5.0kb downstream 5.0kb downstream 7084 true Chr07: 18328780-18335863 Glycine max
Glyma.07G151200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 18328780-18333779 Glycine max
Glyma.07G151200 10.0kb upstream 10.0kb upstream 12084 true Chr07: 18333780-18345863 Glycine max
Glyma.07G151200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 18335864-18345863 Glycine max
Glyma.07G151200 10.0kb downstream 10.0kb downstream 12084 true Chr07: 18323780-18335863 Glycine max
Glyma.07G151200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 18323780-18333779 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309323 5265 Fabidae View MSA
124062218 5270 Rosid View MSA
123751087 5271 Pentapetalae View MSA
122789400 5272 Eudicot View MSA
122050315 5273 Angiosperm View MSA
121311850 5274 Embryophyte View MSA
123349090 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0322462 0.0 0.137417 Low  
cufflinks 0.0154387 0.0 0.0700149 Low  
cufflinks 0.00994013 0.0 0.0470292 Low Low
cufflinks 0.0422268 0.0 0.175893 Low  
cufflinks 0.0274256 0.0 0.118422 Low  
cufflinks 0.15103 0.0 0.595073 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.098     Low  
cufflinks 0.009     Low Low
cufflinks 0.437       High
cufflinks 0.037     Low  
cufflinks 0.029     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.044     Low  
cufflinks 0.023     Low  
cufflinks 1.197       High
cufflinks 0.05     Low  
cufflinks 0.009     Low Low
cufflinks 0.034     Low  
cufflinks 0.03     Low  
cufflinks 0.335       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.012     Low  

0 Strain