Gene : Glyma.07G148700 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR13848:SF5 - PROTEIN YIPPEE-LIKE Genomic Order:  1487
Name:  ? Glyma.07G148700 Secondary Identifier:  ? PAC:30492980
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G148700 0.5kb upstream 0.5kb upstream 3837 true Chr07: 17889530-17893366 Glycine max
Glyma.07G148700 0.5kb upstream 0.5kb upstream 500 false Chr07: 17892867-17893366 Glycine max
Glyma.07G148700 0.5kb downstream 0.5kb downstream 3837 true Chr07: 17889030-17892866 Glycine max
Glyma.07G148700 0.5kb downstream 0.5kb downstream 500 false Chr07: 17889030-17889529 Glycine max
Glyma.07G148700 1.0kb upstream 1.0kb upstream 4337 true Chr07: 17889530-17893866 Glycine max
Glyma.07G148700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 17892867-17893866 Glycine max
Glyma.07G148700 1.0kb downstream 1.0kb downstream 4337 true Chr07: 17888530-17892866 Glycine max
Glyma.07G148700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 17888530-17889529 Glycine max
Glyma.07G148700 2.0kb upstream 2.0kb upstream 5337 true Chr07: 17889530-17894866 Glycine max
Glyma.07G148700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 17892867-17894866 Glycine max
Glyma.07G148700 2.0kb downstream 2.0kb downstream 5337 true Chr07: 17887530-17892866 Glycine max
Glyma.07G148700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 17887530-17889529 Glycine max
Glyma.07G148700 5.0kb upstream 5.0kb upstream 8337 true Chr07: 17889530-17897866 Glycine max
Glyma.07G148700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 17892867-17897866 Glycine max
Glyma.07G148700 5.0kb downstream 5.0kb downstream 8337 true Chr07: 17884530-17892866 Glycine max
Glyma.07G148700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 17884530-17889529 Glycine max
Glyma.07G148700 10.0kb upstream 10.0kb upstream 13337 true Chr07: 17889530-17902866 Glycine max
Glyma.07G148700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 17892867-17902866 Glycine max
Glyma.07G148700 10.0kb downstream 10.0kb downstream 13337 true Chr07: 17879530-17892866 Glycine max
Glyma.07G148700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 17879530-17889529 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300184 5265 Fabidae View MSA
124065020 5270 Rosid View MSA
123748773 5271 Pentapetalae View MSA
122791142 5272 Eudicot View MSA
122047992 5273 Angiosperm View MSA
123428914 5275 Viridiplantae View MSA
121350900 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.92669 0.0 11.2916   High
cufflinks 0.245355 0.0 0.974018    
cufflinks 0.802599 0.0 5.25563    
cufflinks 0.0263147 0.0 0.142613 Low Low
cufflinks 0.573149 0.0 2.90042    
cufflinks 3.27981 0.0 17.2792   High
cufflinks 0.089011 0.0 0.375016 Low  
cufflinks 0.0302786 0.0 0.143991 Low Low
cufflinks 0.037     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.1     Low  
cufflinks 0.02     Low  
cufflinks 0.086        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.036     Low  
cufflinks 0.002     Low Low
cufflinks 0.207       High
cufflinks 0.231       High
cufflinks 0.017     Low  
cufflinks 0.01     Low  
cufflinks 0.039     Low  
cufflinks 0.034     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low  
cufflinks 0.014     Low  

0 Strain