Gene : PhHAL.9G629100 P. hallii HAL v2.1
Defline:  (1 of 1) PTHR10836:SF39 - GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPB, CHLOROPLASTIC Genomic Order:  5510
Name:  ? PhHAL.9G629100 Secondary Identifier:  ? PAC:40401302
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PhalliiHAL CALVIN-PWY Panicum hallii HAL pathologic  
PhalliiHAL PHOTOALL-PWY Panicum hallii HAL pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.9G629100 0.5kb upstream 0.5kb upstream 3775 true Chr09: 69433347-69437121 Panicum hallii HAL
PhHAL.9G629100 0.5kb upstream 0.5kb upstream 500 false Chr09: 69436622-69437121 Panicum hallii HAL
PhHAL.9G629100 0.5kb downstream 0.5kb downstream 3775 true Chr09: 69432847-69436621 Panicum hallii HAL
PhHAL.9G629100 0.5kb downstream 0.5kb downstream 500 false Chr09: 69432847-69433346 Panicum hallii HAL
PhHAL.9G629100 1.0kb upstream 1.0kb upstream 4275 true Chr09: 69433347-69437621 Panicum hallii HAL
PhHAL.9G629100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 69436622-69437621 Panicum hallii HAL
PhHAL.9G629100 1.0kb downstream 1.0kb downstream 4275 true Chr09: 69432347-69436621 Panicum hallii HAL
PhHAL.9G629100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 69432347-69433346 Panicum hallii HAL
PhHAL.9G629100 2.0kb upstream 2.0kb upstream 5275 true Chr09: 69433347-69438621 Panicum hallii HAL
PhHAL.9G629100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 69436622-69438621 Panicum hallii HAL
PhHAL.9G629100 2.0kb downstream 2.0kb downstream 5275 true Chr09: 69431347-69436621 Panicum hallii HAL
PhHAL.9G629100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 69431347-69433346 Panicum hallii HAL
PhHAL.9G629100 5.0kb upstream 5.0kb upstream 8275 true Chr09: 69433347-69441621 Panicum hallii HAL
PhHAL.9G629100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 69436622-69441621 Panicum hallii HAL
PhHAL.9G629100 5.0kb downstream 5.0kb downstream 8275 true Chr09: 69428347-69436621 Panicum hallii HAL
PhHAL.9G629100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 69428347-69433346 Panicum hallii HAL
PhHAL.9G629100 10.0kb upstream 10.0kb upstream 13275 true Chr09: 69433347-69446621 Panicum hallii HAL
PhHAL.9G629100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 69436622-69446621 Panicum hallii HAL
PhHAL.9G629100 10.0kb downstream 10.0kb downstream 13275 true Chr09: 69423347-69436621 Panicum hallii HAL
PhHAL.9G629100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 69423347-69433346 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183914 5267 Panicoideae View MSA
124578488 5269 Grass View MSA
122047323 5273 Angiosperm View MSA
121310728 5274 Embryophyte View MSA
123425156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier