Gene : Glyma.07G195800 G. max Wm82.a2.v1
Defline:  (1 of 9) PF05755 - Rubber elongation factor protein (REF) (REF) Genomic Order:  1958
Name:  ? Glyma.07G195800 Secondary Identifier:  ? PAC:30494801
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Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G195800 0.5kb upstream 0.5kb upstream 1532 true Chr07: 36433681-36435212 Glycine max
Glyma.07G195800 0.5kb upstream 0.5kb upstream 500 false Chr07: 36433681-36434180 Glycine max
Glyma.07G195800 0.5kb downstream 0.5kb downstream 1532 true Chr07: 36434181-36435712 Glycine max
Glyma.07G195800 0.5kb downstream 0.5kb downstream 500 false Chr07: 36435213-36435712 Glycine max
Glyma.07G195800 1.0kb upstream 1.0kb upstream 2032 true Chr07: 36433181-36435212 Glycine max
Glyma.07G195800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 36433181-36434180 Glycine max
Glyma.07G195800 1.0kb downstream 1.0kb downstream 2032 true Chr07: 36434181-36436212 Glycine max
Glyma.07G195800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 36435213-36436212 Glycine max
Glyma.07G195800 2.0kb upstream 2.0kb upstream 3032 true Chr07: 36432181-36435212 Glycine max
Glyma.07G195800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 36432181-36434180 Glycine max
Glyma.07G195800 2.0kb downstream 2.0kb downstream 3032 true Chr07: 36434181-36437212 Glycine max
Glyma.07G195800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 36435213-36437212 Glycine max
Glyma.07G195800 5.0kb upstream 5.0kb upstream 6032 true Chr07: 36429181-36435212 Glycine max
Glyma.07G195800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 36429181-36434180 Glycine max
Glyma.07G195800 5.0kb downstream 5.0kb downstream 6032 true Chr07: 36434181-36440212 Glycine max
Glyma.07G195800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 36435213-36440212 Glycine max
Glyma.07G195800 10.0kb upstream 10.0kb upstream 11032 true Chr07: 36424181-36435212 Glycine max
Glyma.07G195800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 36424181-36434180 Glycine max
Glyma.07G195800 10.0kb downstream 10.0kb downstream 11032 true Chr07: 36434181-36445212 Glycine max
Glyma.07G195800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 36435213-36445212 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121656191 5273 Angiosperm View MSA
122297777 5265 Fabidae View MSA
124036148 5270 Rosid View MSA
123609537 5271 Pentapetalae View MSA
122644185 5272 Eudicot View MSA
120928276 5274 Embryophyte View MSA
122968889 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.00154 0.0 39.9138   High
cufflinks 1.35552 0.0 16.2209    
cufflinks 2.94484 0.0 30.1179   High
cufflinks 0.622687 0.0 10.8611    
cufflinks 0.822647 0.0 9.83272    
cufflinks 0.682704 0.0 8.91207    
cufflinks 0.368366 0.0 6.89423   Low
cufflinks 0.593781 0.0 10.3954    
cufflinks 0.883018 0.0 11.0359    
cufflinks 0.198        
cufflinks 0.313        
cufflinks 0.62        
cufflinks 0.3        
cufflinks 0.26        
cufflinks 0.487        
cufflinks 1.511       High
cufflinks 0.085       Low
cufflinks 0.565        
cufflinks 0.485        
cufflinks 1.466       High
cufflinks 0.183       Low
cufflinks 1.207       High
cufflinks 0.809        
cufflinks 0.332        
cufflinks 1.063       High
cufflinks 0.158       Low

0 Strain