Gene : Glyma.07G189900 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR22912:SF180 - 3-PHENYLPROPIONATE/CINNAMIC ACID DIOXYGENASE FERREDOXIN--NAD(+) REDUCTASE COMPONENT Genomic Order:  1899
Name:  ? Glyma.07G189900 Secondary Identifier:  ? PAC:30493961
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7279 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G189900 0.5kb upstream 0.5kb upstream 6162 true Chr07: 35774152-35780313 Glycine max
Glyma.07G189900 0.5kb upstream 0.5kb upstream 500 false Chr07: 35779814-35780313 Glycine max
Glyma.07G189900 0.5kb downstream 0.5kb downstream 6162 true Chr07: 35773652-35779813 Glycine max
Glyma.07G189900 0.5kb downstream 0.5kb downstream 500 false Chr07: 35773652-35774151 Glycine max
Glyma.07G189900 1.0kb upstream 1.0kb upstream 6662 true Chr07: 35774152-35780813 Glycine max
Glyma.07G189900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 35779814-35780813 Glycine max
Glyma.07G189900 1.0kb downstream 1.0kb downstream 6662 true Chr07: 35773152-35779813 Glycine max
Glyma.07G189900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 35773152-35774151 Glycine max
Glyma.07G189900 2.0kb upstream 2.0kb upstream 7662 true Chr07: 35774152-35781813 Glycine max
Glyma.07G189900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 35779814-35781813 Glycine max
Glyma.07G189900 2.0kb downstream 2.0kb downstream 7662 true Chr07: 35772152-35779813 Glycine max
Glyma.07G189900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 35772152-35774151 Glycine max
Glyma.07G189900 5.0kb upstream 5.0kb upstream 10662 true Chr07: 35774152-35784813 Glycine max
Glyma.07G189900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 35779814-35784813 Glycine max
Glyma.07G189900 5.0kb downstream 5.0kb downstream 10662 true Chr07: 35769152-35779813 Glycine max
Glyma.07G189900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 35769152-35774151 Glycine max
Glyma.07G189900 10.0kb upstream 10.0kb upstream 15662 true Chr07: 35774152-35789813 Glycine max
Glyma.07G189900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 35779814-35789813 Glycine max
Glyma.07G189900 10.0kb downstream 10.0kb downstream 15662 true Chr07: 35764152-35779813 Glycine max
Glyma.07G189900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 35764152-35774151 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313743 5265 Fabidae View MSA
124072571 5270 Rosid View MSA
123740807 5271 Pentapetalae View MSA
122787456 5272 Eudicot View MSA
122046891 5273 Angiosperm View MSA
121348097 5274 Embryophyte View MSA
123427504 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.989 0.0 69.8685   High
cufflinks 4.97423 0.0 19.3612   Low
cufflinks 8.17684 0.0 33.4391    
cufflinks 10.0391 0.0 36.1309    
cufflinks 17.1595 0.0 69.7344    
cufflinks 19.4456 0.0 71.4119   High
cufflinks 6.98056 0.0 25.7563    
cufflinks 18.1675 0.0 66.3727    
cufflinks 5.75923 0.0 21.9611   Low
cufflinks 5.211       High
cufflinks 1.351        
cufflinks 1.777        
cufflinks 3.819       High
cufflinks 4.061       High
cufflinks 0.5       Low
cufflinks 1.097        
cufflinks 4.448       High
cufflinks 2.249        
cufflinks 1.521        
cufflinks 0.675       Low
cufflinks 1.272        
cufflinks 0.98        
cufflinks 1.407        
cufflinks 1.757        
cufflinks 0.856       Low
cufflinks 3.673       High

0 Strain