Gene : PhHAL.9G065200 P. hallii HAL v2.1

Defline:  (1 of 2) K00234 - succinate dehydrogenase (ubiquinone) flavoprotein subunit (SDHA, SDH1) Genomic Order:  639
Name:  ? PhHAL.9G065200 Secondary Identifier:  ? PAC:40398850

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PhalliiHAL PWY-3781 Panicum hallii HAL pathologic  
PhalliiHAL PWY-4302 Panicum hallii HAL pathologic  
PhalliiHAL PWY-5464 Panicum hallii HAL pathologic  
PhalliiHAL PWY-561 Panicum hallii HAL pathologic  
PhalliiHAL PWY-5690 Panicum hallii HAL pathologic  
PhalliiHAL PWY-7279 Panicum hallii HAL pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.9G065200 0.5kb upstream 0.5kb upstream 5728 true Chr09: 3706421-3712148 Panicum hallii HAL
PhHAL.9G065200 0.5kb upstream 0.5kb upstream 500 false Chr09: 3706421-3706920 Panicum hallii HAL
PhHAL.9G065200 0.5kb downstream 0.5kb downstream 5728 true Chr09: 3706921-3712648 Panicum hallii HAL
PhHAL.9G065200 0.5kb downstream 0.5kb downstream 500 false Chr09: 3712149-3712648 Panicum hallii HAL
PhHAL.9G065200 1.0kb upstream 1.0kb upstream 6228 true Chr09: 3705921-3712148 Panicum hallii HAL
PhHAL.9G065200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 3705921-3706920 Panicum hallii HAL
PhHAL.9G065200 1.0kb downstream 1.0kb downstream 6228 true Chr09: 3706921-3713148 Panicum hallii HAL
PhHAL.9G065200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 3712149-3713148 Panicum hallii HAL
PhHAL.9G065200 2.0kb upstream 2.0kb upstream 7228 true Chr09: 3704921-3712148 Panicum hallii HAL
PhHAL.9G065200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 3704921-3706920 Panicum hallii HAL
PhHAL.9G065200 2.0kb downstream 2.0kb downstream 7228 true Chr09: 3706921-3714148 Panicum hallii HAL
PhHAL.9G065200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 3712149-3714148 Panicum hallii HAL
PhHAL.9G065200 5.0kb upstream 5.0kb upstream 10228 true Chr09: 3701921-3712148 Panicum hallii HAL
PhHAL.9G065200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 3701921-3706920 Panicum hallii HAL
PhHAL.9G065200 5.0kb downstream 5.0kb downstream 10228 true Chr09: 3706921-3717148 Panicum hallii HAL
PhHAL.9G065200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 3712149-3717148 Panicum hallii HAL
PhHAL.9G065200 10.0kb upstream 10.0kb upstream 15228 true Chr09: 3696921-3712148 Panicum hallii HAL
PhHAL.9G065200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 3696921-3706920 Panicum hallii HAL
PhHAL.9G065200 10.0kb downstream 10.0kb downstream 15228 true Chr09: 3706921-3722148 Panicum hallii HAL
PhHAL.9G065200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 3712149-3722148 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190568 5267 Panicoideae View MSA
124571712 5269 Grass View MSA
122043363 5273 Angiosperm View MSA
121346345 5274 Embryophyte View MSA
123424943 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier