Gene : Glyma.07G193800 G. max Wm82.a2.v1
Defline:  (1 of 30) PF06749 - Protein of unknown function (DUF1218) (DUF1218) Genomic Order:  1938
Name:  ? Glyma.07G193800 Secondary Identifier:  ? PAC:30491509
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G193800 0.5kb upstream 0.5kb upstream 5092 true Chr07: 36240712-36245803 Glycine max
Glyma.07G193800 0.5kb upstream 0.5kb upstream 500 false Chr07: 36240712-36241211 Glycine max
Glyma.07G193800 0.5kb downstream 0.5kb downstream 5092 true Chr07: 36241212-36246303 Glycine max
Glyma.07G193800 0.5kb downstream 0.5kb downstream 500 false Chr07: 36245804-36246303 Glycine max
Glyma.07G193800 1.0kb upstream 1.0kb upstream 5592 true Chr07: 36240212-36245803 Glycine max
Glyma.07G193800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 36240212-36241211 Glycine max
Glyma.07G193800 1.0kb downstream 1.0kb downstream 5592 true Chr07: 36241212-36246803 Glycine max
Glyma.07G193800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 36245804-36246803 Glycine max
Glyma.07G193800 2.0kb upstream 2.0kb upstream 6592 true Chr07: 36239212-36245803 Glycine max
Glyma.07G193800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 36239212-36241211 Glycine max
Glyma.07G193800 2.0kb downstream 2.0kb downstream 6592 true Chr07: 36241212-36247803 Glycine max
Glyma.07G193800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 36245804-36247803 Glycine max
Glyma.07G193800 5.0kb upstream 5.0kb upstream 9592 true Chr07: 36236212-36245803 Glycine max
Glyma.07G193800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 36236212-36241211 Glycine max
Glyma.07G193800 5.0kb downstream 5.0kb downstream 9592 true Chr07: 36241212-36250803 Glycine max
Glyma.07G193800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 36245804-36250803 Glycine max
Glyma.07G193800 10.0kb upstream 10.0kb upstream 14592 true Chr07: 36231212-36245803 Glycine max
Glyma.07G193800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 36231212-36241211 Glycine max
Glyma.07G193800 10.0kb downstream 10.0kb downstream 14592 true Chr07: 36241212-36255803 Glycine max
Glyma.07G193800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 36245804-36255803 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026895 5273 Angiosperm View MSA
122308002 5265 Fabidae View MSA
124063310 5270 Rosid View MSA
123738532 5271 Pentapetalae View MSA
122795984 5272 Eudicot View MSA
121349405 5274 Embryophyte View MSA
123381298 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.43888 0.0 26.2965    
cufflinks 10.0757 0.0 41.8215    
cufflinks 16.4184 0.0 60.1612    
cufflinks 4.61463 0.0 21.1718   Low
cufflinks 48.161 0.0 164.579 High  
cufflinks 19.8755 0.0 70.3938    
cufflinks 7.1002 0.0 28.1459    
cufflinks 41.1419 0.0 139.624 High  
cufflinks 100.64 0.0 386.741 High High
cufflinks 1.148        
cufflinks 3.23       High
cufflinks 0.982        
cufflinks 1.661        
cufflinks 1.545        
cufflinks 8.597     High High
cufflinks 0.469       Low
cufflinks 1.342        
cufflinks 0.707        
cufflinks 1.537        
cufflinks 0.522       Low
cufflinks 2.496        
cufflinks 0.454       Low
cufflinks 0.642        
cufflinks 3.007       High
cufflinks 0.538       Low
cufflinks 1.339        

0 Strain