Gene : PhHAL.8G195800 P. hallii HAL v2.1

Defline:  (1 of 1) PTHR13343:SF13 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN-LIKE PROTEIN Genomic Order:  1367
Name:  ? PhHAL.8G195800 Secondary Identifier:  ? PAC:40418123

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.8G195800 0.5kb upstream 0.5kb upstream 3733 true Chr08: 36538625-36542357 Panicum hallii HAL
PhHAL.8G195800 0.5kb upstream 0.5kb upstream 500 false Chr08: 36538625-36539124 Panicum hallii HAL
PhHAL.8G195800 0.5kb downstream 0.5kb downstream 3733 true Chr08: 36539125-36542857 Panicum hallii HAL
PhHAL.8G195800 0.5kb downstream 0.5kb downstream 500 false Chr08: 36542358-36542857 Panicum hallii HAL
PhHAL.8G195800 1.0kb upstream 1.0kb upstream 4233 true Chr08: 36538125-36542357 Panicum hallii HAL
PhHAL.8G195800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 36538125-36539124 Panicum hallii HAL
PhHAL.8G195800 1.0kb downstream 1.0kb downstream 4233 true Chr08: 36539125-36543357 Panicum hallii HAL
PhHAL.8G195800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 36542358-36543357 Panicum hallii HAL
PhHAL.8G195800 2.0kb upstream 2.0kb upstream 5233 true Chr08: 36537125-36542357 Panicum hallii HAL
PhHAL.8G195800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 36537125-36539124 Panicum hallii HAL
PhHAL.8G195800 2.0kb downstream 2.0kb downstream 5233 true Chr08: 36539125-36544357 Panicum hallii HAL
PhHAL.8G195800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 36542358-36544357 Panicum hallii HAL
PhHAL.8G195800 5.0kb upstream 5.0kb upstream 8233 true Chr08: 36534125-36542357 Panicum hallii HAL
PhHAL.8G195800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 36534125-36539124 Panicum hallii HAL
PhHAL.8G195800 5.0kb downstream 5.0kb downstream 8233 true Chr08: 36539125-36547357 Panicum hallii HAL
PhHAL.8G195800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 36542358-36547357 Panicum hallii HAL
PhHAL.8G195800 10.0kb upstream 10.0kb upstream 13233 true Chr08: 36529125-36542357 Panicum hallii HAL
PhHAL.8G195800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 36529125-36539124 Panicum hallii HAL
PhHAL.8G195800 10.0kb downstream 10.0kb downstream 13233 true Chr08: 36539125-36552357 Panicum hallii HAL
PhHAL.8G195800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 36542358-36552357 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189923 5267 Panicoideae View MSA
124589351 5269 Grass View MSA
122050575 5273 Angiosperm View MSA
121348228 5274 Embryophyte View MSA
123380781 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier