Gene : PhHAL.9G183700 P. hallii HAL v2.1

Defline:  (1 of 2) PTHR12358//PTHR12358:SF39 - SPHINGOSINE KINASE // SUBFAMILY NOT NAMED Genomic Order:  1792
Name:  ? PhHAL.9G183700 Secondary Identifier:  ? PAC:40397072

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PhalliiHAL PWY-5129 Panicum hallii HAL pathologic  
PhalliiHAL PWY-6483 Panicum hallii HAL pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.9G183700 0.5kb upstream 0.5kb upstream 8836 true Chr09: 11574947-11583782 Panicum hallii HAL
PhHAL.9G183700 0.5kb upstream 0.5kb upstream 500 false Chr09: 11583283-11583782 Panicum hallii HAL
PhHAL.9G183700 0.5kb downstream 0.5kb downstream 8836 true Chr09: 11574447-11583282 Panicum hallii HAL
PhHAL.9G183700 0.5kb downstream 0.5kb downstream 500 false Chr09: 11574447-11574946 Panicum hallii HAL
PhHAL.9G183700 1.0kb upstream 1.0kb upstream 9336 true Chr09: 11574947-11584282 Panicum hallii HAL
PhHAL.9G183700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 11583283-11584282 Panicum hallii HAL
PhHAL.9G183700 1.0kb downstream 1.0kb downstream 9336 true Chr09: 11573947-11583282 Panicum hallii HAL
PhHAL.9G183700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 11573947-11574946 Panicum hallii HAL
PhHAL.9G183700 2.0kb upstream 2.0kb upstream 10336 true Chr09: 11574947-11585282 Panicum hallii HAL
PhHAL.9G183700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 11583283-11585282 Panicum hallii HAL
PhHAL.9G183700 2.0kb downstream 2.0kb downstream 10336 true Chr09: 11572947-11583282 Panicum hallii HAL
PhHAL.9G183700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 11572947-11574946 Panicum hallii HAL
PhHAL.9G183700 5.0kb upstream 5.0kb upstream 13336 true Chr09: 11574947-11588282 Panicum hallii HAL
PhHAL.9G183700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 11583283-11588282 Panicum hallii HAL
PhHAL.9G183700 5.0kb downstream 5.0kb downstream 13336 true Chr09: 11569947-11583282 Panicum hallii HAL
PhHAL.9G183700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 11569947-11574946 Panicum hallii HAL
PhHAL.9G183700 10.0kb upstream 10.0kb upstream 18336 true Chr09: 11574947-11593282 Panicum hallii HAL
PhHAL.9G183700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 11583283-11593282 Panicum hallii HAL
PhHAL.9G183700 10.0kb downstream 10.0kb downstream 18336 true Chr09: 11564947-11583282 Panicum hallii HAL
PhHAL.9G183700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 11564947-11574946 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187978 5267 Panicoideae View MSA
124577757 5269 Grass View MSA
122046814 5273 Angiosperm View MSA
121349004 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier