Gene : Glyma.07G227400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12214 - GC-RICH SEQUENCE DNA-BINDING FACTOR Genomic Order:  2274
Name:  ? Glyma.07G227400 Secondary Identifier:  ? PAC:30495273
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G227400 0.5kb upstream 0.5kb upstream 6899 true Chr07: 40505180-40512078 Glycine max
Glyma.07G227400 0.5kb upstream 0.5kb upstream 500 false Chr07: 40511579-40512078 Glycine max
Glyma.07G227400 0.5kb downstream 0.5kb downstream 6899 true Chr07: 40504680-40511578 Glycine max
Glyma.07G227400 0.5kb downstream 0.5kb downstream 500 false Chr07: 40504680-40505179 Glycine max
Glyma.07G227400 1.0kb upstream 1.0kb upstream 7399 true Chr07: 40505180-40512578 Glycine max
Glyma.07G227400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 40511579-40512578 Glycine max
Glyma.07G227400 1.0kb downstream 1.0kb downstream 7399 true Chr07: 40504180-40511578 Glycine max
Glyma.07G227400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 40504180-40505179 Glycine max
Glyma.07G227400 2.0kb upstream 2.0kb upstream 8399 true Chr07: 40505180-40513578 Glycine max
Glyma.07G227400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 40511579-40513578 Glycine max
Glyma.07G227400 2.0kb downstream 2.0kb downstream 8399 true Chr07: 40503180-40511578 Glycine max
Glyma.07G227400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 40503180-40505179 Glycine max
Glyma.07G227400 5.0kb upstream 5.0kb upstream 11399 true Chr07: 40505180-40516578 Glycine max
Glyma.07G227400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 40511579-40516578 Glycine max
Glyma.07G227400 5.0kb downstream 5.0kb downstream 11399 true Chr07: 40500180-40511578 Glycine max
Glyma.07G227400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 40500180-40505179 Glycine max
Glyma.07G227400 10.0kb upstream 10.0kb upstream 16399 true Chr07: 40505180-40521578 Glycine max
Glyma.07G227400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 40511579-40521578 Glycine max
Glyma.07G227400 10.0kb downstream 10.0kb downstream 16399 true Chr07: 40495180-40511578 Glycine max
Glyma.07G227400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 40495180-40505179 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301094 5265 Fabidae View MSA
124050258 5270 Rosid View MSA
123739930 5271 Pentapetalae View MSA
122786850 5272 Eudicot View MSA
122041525 5273 Angiosperm View MSA
121344112 5274 Embryophyte View MSA
123425379 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.29116 0.0 6.65462    
cufflinks 2.34859 0.0 6.81076    
cufflinks 1.45166 0.0 4.49013    
cufflinks 2.3002 0.0 6.67909    
cufflinks 2.16954 0.0 6.34246    
cufflinks 0.838132 0.0 2.79697   Low
cufflinks 3.58264 0.0 9.91601   High
cufflinks 1.85563 0.0 5.5444    
cufflinks 1.84128 0.0 5.51042    
cufflinks 0.791       Low
cufflinks 0.758       Low
cufflinks 1.458        
cufflinks 0.939        
cufflinks 1.418        
cufflinks 1.139        
cufflinks 1.423        
cufflinks 0.643       Low
cufflinks 1.617       High
cufflinks 1.589       High
cufflinks 1.385        
cufflinks 0.773       Low
cufflinks 1.483        
cufflinks 1.356        
cufflinks 0.808       Low
cufflinks 1.41        
cufflinks 0.817        

0 Strain