Gene : Glyma.07G227600 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR31558:SF3 - CW14 PROTEIN Genomic Order:  2276
Name:  ? Glyma.07G227600 Secondary Identifier:  ? PAC:30491368
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G227600 0.5kb upstream 0.5kb upstream 7322 true Chr07: 40531012-40538333 Glycine max
Glyma.07G227600 0.5kb upstream 0.5kb upstream 500 false Chr07: 40537834-40538333 Glycine max
Glyma.07G227600 0.5kb downstream 0.5kb downstream 7322 true Chr07: 40530512-40537833 Glycine max
Glyma.07G227600 0.5kb downstream 0.5kb downstream 500 false Chr07: 40530512-40531011 Glycine max
Glyma.07G227600 1.0kb upstream 1.0kb upstream 7822 true Chr07: 40531012-40538833 Glycine max
Glyma.07G227600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 40537834-40538833 Glycine max
Glyma.07G227600 1.0kb downstream 1.0kb downstream 7822 true Chr07: 40530012-40537833 Glycine max
Glyma.07G227600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 40530012-40531011 Glycine max
Glyma.07G227600 2.0kb upstream 2.0kb upstream 8822 true Chr07: 40531012-40539833 Glycine max
Glyma.07G227600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 40537834-40539833 Glycine max
Glyma.07G227600 2.0kb downstream 2.0kb downstream 8822 true Chr07: 40529012-40537833 Glycine max
Glyma.07G227600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 40529012-40531011 Glycine max
Glyma.07G227600 5.0kb upstream 5.0kb upstream 11822 true Chr07: 40531012-40542833 Glycine max
Glyma.07G227600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 40537834-40542833 Glycine max
Glyma.07G227600 5.0kb downstream 5.0kb downstream 11822 true Chr07: 40526012-40537833 Glycine max
Glyma.07G227600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 40526012-40531011 Glycine max
Glyma.07G227600 10.0kb upstream 10.0kb upstream 16822 true Chr07: 40531012-40547833 Glycine max
Glyma.07G227600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 40537834-40547833 Glycine max
Glyma.07G227600 10.0kb downstream 10.0kb downstream 16822 true Chr07: 40521012-40537833 Glycine max
Glyma.07G227600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 40521012-40531011 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255334 5265 Fabidae View MSA
124073265 5270 Rosid View MSA
123751293 5271 Pentapetalae View MSA
122789069 5272 Eudicot View MSA
122042640 5273 Angiosperm View MSA
121348788 5274 Embryophyte View MSA
123427527 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.332586 0.0 2.14779   Low
cufflinks 0.445182 0.0 2.76935    
cufflinks 7.72404 0.0 31.5774   High
cufflinks 2.05608 0.0 11.0653    
cufflinks 0.651679 0.0 2.94724    
cufflinks 1.25028 0.0 9.66967    
cufflinks 4.39319 0.0 20.8915   High
cufflinks 0.616231 0.0 2.79947    
cufflinks 0.862243 0.0 4.84148    
cufflinks 0.003     Low Low
cufflinks 0.045     Low  
cufflinks 0.391       High
cufflinks 0.047     Low  
cufflinks 0.024     Low  
cufflinks 0.01     Low  
cufflinks 0.015     Low  
cufflinks 0.061     Low  
cufflinks 0.859       High
cufflinks 0.013     Low  
cufflinks 0.004     Low Low
cufflinks 0.038     Low  
cufflinks 0.008     Low  
cufflinks 0.005     Low  
cufflinks 0.143       High
cufflinks 0.003     Low Low
cufflinks 0.059     Low  

0 Strain