Gene : Glyma.07G214800 G. max Wm82.a2.v1
Defline:  (1 of 477) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  2148
Name:  ? Glyma.07G214800 Secondary Identifier:  ? PAC:30494426
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G214800 0.5kb upstream 0.5kb upstream 3184 true Chr07: 38702213-38705396 Glycine max
Glyma.07G214800 0.5kb upstream 0.5kb upstream 500 false Chr07: 38702213-38702712 Glycine max
Glyma.07G214800 0.5kb downstream 0.5kb downstream 3184 true Chr07: 38702713-38705896 Glycine max
Glyma.07G214800 0.5kb downstream 0.5kb downstream 500 false Chr07: 38705397-38705896 Glycine max
Glyma.07G214800 1.0kb upstream 1.0kb upstream 3684 true Chr07: 38701713-38705396 Glycine max
Glyma.07G214800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 38701713-38702712 Glycine max
Glyma.07G214800 1.0kb downstream 1.0kb downstream 3684 true Chr07: 38702713-38706396 Glycine max
Glyma.07G214800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 38705397-38706396 Glycine max
Glyma.07G214800 2.0kb upstream 2.0kb upstream 4684 true Chr07: 38700713-38705396 Glycine max
Glyma.07G214800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 38700713-38702712 Glycine max
Glyma.07G214800 2.0kb downstream 2.0kb downstream 4684 true Chr07: 38702713-38707396 Glycine max
Glyma.07G214800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 38705397-38707396 Glycine max
Glyma.07G214800 5.0kb upstream 5.0kb upstream 7684 true Chr07: 38697713-38705396 Glycine max
Glyma.07G214800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 38697713-38702712 Glycine max
Glyma.07G214800 5.0kb downstream 5.0kb downstream 7684 true Chr07: 38702713-38710396 Glycine max
Glyma.07G214800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 38705397-38710396 Glycine max
Glyma.07G214800 10.0kb upstream 10.0kb upstream 12684 true Chr07: 38692713-38705396 Glycine max
Glyma.07G214800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 38692713-38702712 Glycine max
Glyma.07G214800 10.0kb downstream 10.0kb downstream 12684 true Chr07: 38702713-38715396 Glycine max
Glyma.07G214800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 38705397-38715396 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309087 5265 Fabidae View MSA
124068279 5270 Rosid View MSA
123741422 5271 Pentapetalae View MSA
122786539 5272 Eudicot View MSA
122041629 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121309872 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.7583 0.0 23.8474   High
cufflinks 3.96035 0.0 20.9543    
cufflinks 2.85415 0.0 15.9131    
cufflinks 2.97904 0.0 16.4806    
cufflinks 2.76431 0.0 15.5208   Low
cufflinks 4.17422 0.0 21.6519    
cufflinks 4.80769 0.0 24.1348   High
cufflinks 3.62593 0.0 19.2767    
cufflinks 2.69211 0.0 15.1973   Low
cufflinks 0.349        
cufflinks 0.101       Low
cufflinks 0.468       High
cufflinks 0.528       High
cufflinks 0.521       High
cufflinks 0.059       Low
cufflinks 0.288        
cufflinks 0.187        
cufflinks 0.342        
cufflinks 0.533       High
cufflinks 0.186        
cufflinks 0.111       Low
cufflinks 0.222        
cufflinks 0.457        
cufflinks 0.174        
cufflinks 0.189        
cufflinks 0.18        

0 Strain